Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   I33_RS04465 Genome accession   NC_017195
Coordinates   904874..905668 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis subsp. subtilis str. RO-NN-1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 899874..910668
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I33_RS04440 (I33_0950) sxzA 900713..901744 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  I33_RS04445 (I33_0951) yfhB 901859..902740 (+) 882 WP_014476205.1 PhzF family phenazine biosynthesis isomerase -
  I33_RS04450 (I33_0952) yfhC 902828..903412 (+) 585 WP_014476206.1 nitroreductase -
  I33_RS04455 (I33_0953) yfhD 903451..903642 (-) 192 WP_003233561.1 YfhD family protein -
  I33_RS20125 (I33_0954) yfhE 903709..903819 (-) 111 WP_003223230.1 YfhE family protein -
  I33_RS04460 (I33_0955) yfhF 903874..904785 (-) 912 WP_014476207.1 TIGR01777 family oxidoreductase -
  I33_RS04465 (I33_0956) recX 904874..905668 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  I33_RS04470 (I33_0957) yfhH 905670..905984 (+) 315 WP_014476208.1 YfhH family protein -
  I33_RS04475 (I33_0958) yfhI 906128..907321 (+) 1194 WP_014476209.1 MFS transporter -
  I33_RS04480 (I33_0959) sspK 907353..907505 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  I33_RS04485 (I33_0960) yfhJ 907630..907899 (+) 270 WP_003243789.1 YfhJ family protein -
  I33_RS04490 (I33_0961) yfhK 908042..908560 (+) 519 WP_014476210.1 SH3 domain-containing protein -
  I33_RS04495 (I33_0962) spdL 908645..908977 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  I33_RS04500 ephM 908964..909824 (+) 861 WP_041519173.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=45386 I33_RS04465 WP_003243354.1 904874..905668(+) (recX) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=45386 I33_RS04465 WP_003243354.1 904874..905668(+) (recX) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACGAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCATTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment