Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   I6I02_RS10190 Genome accession   NZ_CP066093
Coordinates   2200695..2201468 (-) Length   257 a.a.
NCBI ID   WP_198463561.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2195695..2206468
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS10175 (I6I02_10175) purC 2198272..2198979 (-) 708 WP_198463560.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
  I6I02_RS10180 (I6I02_10180) - 2199234..2199479 (-) 246 WP_049545080.1 phosphopantetheine-binding protein -
  I6I02_RS10185 (I6I02_10185) plsX 2199479..2200483 (-) 1005 WP_013989885.1 phosphate acyltransferase PlsX -
  I6I02_RS10190 (I6I02_10190) recO 2200695..2201468 (-) 774 WP_198463561.1 DNA repair protein RecO Machinery gene
  I6I02_RS10195 (I6I02_10195) - 2201455..2202630 (-) 1176 WP_073685338.1 pyridoxal phosphate-dependent aminotransferase -
  I6I02_RS10200 (I6I02_10200) - 2202722..2203687 (-) 966 WP_002886286.1 ribose-phosphate diphosphokinase -
  I6I02_RS10205 (I6I02_10205) - 2203983..2205232 (+) 1250 Protein_1999 ISL3 family transposase -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29774.97 Da        Isoelectric Point: 4.8553

>NTDB_id=453826 I6I02_RS10190 WP_198463561.1 2200695..2201468(-) (recO) [Streptococcus salivarius strain FDAARGOS_1045]
MQKLESRGLVLFNRNYRENDKLVKIFTEQAGKRMFFVRGGGAGKLSAVIQPLTIAEFMMTVNDEGLSFIEDYSQVESFKE
ITSDIFKLSYATYLAALTDATIADGVADAQLFVFLEKTLELMEEGLDYEILTNIFEIQVLDRFGVRLNFHECVFCHRVGL
PFDFSFKFSGLLCPNHYAEDERRSHLDPNVPYLLDRFQGLSFEELRSISVKDDMKRKLRYFIDDLYDNYVGIHLKSKKFI
DNLNSWGHIMNKEDSAD

Nucleotide


Download         Length: 774 bp        

>NTDB_id=453826 I6I02_RS10190 WP_198463561.1 2200695..2201468(-) (recO) [Streptococcus salivarius strain FDAARGOS_1045]
ATGCAGAAGCTTGAGAGTAGAGGGCTTGTCCTCTTCAATCGTAATTATCGTGAGAATGATAAACTAGTTAAAATTTTTAC
CGAGCAAGCTGGTAAACGGATGTTTTTTGTTAGAGGTGGTGGGGCAGGTAAATTAAGTGCTGTCATTCAACCTTTGACCA
TCGCTGAATTCATGATGACTGTAAATGATGAAGGTCTATCTTTCATAGAAGATTATAGCCAGGTAGAGTCCTTCAAGGAA
ATTACAAGCGATATTTTCAAGCTGTCTTATGCGACTTATTTGGCTGCATTGACAGATGCTACTATTGCTGATGGTGTGGC
AGATGCGCAATTATTTGTATTCTTGGAGAAGACGCTTGAATTAATGGAAGAAGGCTTGGATTATGAAATCTTGACTAATA
TCTTTGAGATTCAGGTTTTAGACCGTTTCGGCGTACGCTTGAATTTTCACGAGTGTGTCTTTTGTCATCGTGTAGGCCTT
CCTTTTGATTTCTCGTTTAAGTTCTCGGGGCTACTTTGTCCAAATCACTATGCAGAGGATGAAAGGCGTAGCCACTTGGA
CCCTAATGTGCCTTATCTTTTAGATCGTTTTCAGGGGCTTTCCTTTGAAGAATTGAGAAGCATATCTGTTAAGGATGACA
TGAAACGAAAGCTACGATATTTTATCGATGACCTCTATGATAATTATGTTGGAATACATCTTAAAAGTAAGAAGTTTATT
GATAATCTAAATTCTTGGGGCCATATTATGAATAAAGAAGATAGTGCTGACTAG

Domains

Predicted by InterProScan.

Recombination protein O N terminal (RecO_N)

(1-78)

Recombination protein O C terminal (RecO_C)

(83-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

63.241

98.444

0.623