Detailed information    

insolico Bioinformatically predicted

Overview

Name   xerS   Type   Machinery gene
Locus tag   I6I02_RS07705 Genome accession   NZ_CP066093
Coordinates   1686556..1687629 (-) Length   357 a.a.
NCBI ID   WP_045772541.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1681556..1692629
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS07685 (I6I02_07685) - 1682910..1683269 (+) 360 WP_198463388.1 hypothetical protein -
  I6I02_RS07690 (I6I02_07690) - 1683975..1684388 (-) 414 WP_198463389.1 hypothetical protein -
  I6I02_RS07695 (I6I02_07695) - 1684813..1685658 (-) 846 WP_073689375.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
  I6I02_RS07700 (I6I02_07700) - 1685655..1686245 (-) 591 WP_198463390.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  I6I02_RS07705 (I6I02_07705) xerS 1686556..1687629 (-) 1074 WP_045772541.1 tyrosine recombinase XerS Machinery gene
  I6I02_RS07710 (I6I02_07710) - 1689127..1689330 (-) 204 WP_198463391.1 hypothetical protein -
  I6I02_RS07715 (I6I02_07715) - 1689360..1690343 (-) 984 WP_198463392.1 hypothetical protein -
  I6I02_RS07720 (I6I02_07720) - 1690336..1691766 (-) 1431 WP_198463393.1 hypothetical protein -
  I6I02_RS11135 - 1691933..1692364 (-) 432 Protein_1535 IS30 family transposase -

Sequence

Protein


Download         Length: 357 a.a.        Molecular weight: 41435.65 Da        Isoelectric Point: 9.4006

>NTDB_id=453794 I6I02_RS07705 WP_045772541.1 1686556..1687629(-) (xerS) [Streptococcus salivarius strain FDAARGOS_1045]
MKQETLMKNINELLEIMPWYVKEYYQAKLVIPYSYKTLYEYLKEYRRFFEWLISDHEELGKTVRYADYNTIADVHIDELA
HLPKSVIEGYFVYLRENTERRSISEVSIIRTKDALSSLFKYLTQETEDDEGEPYFYRNVMVKVKIKKPKDTLASRADNMK
EKLFLNDTQSFLDYIDNEHEKKISKRAQVSFVKNKERDLAVIALLLSTGVRLSELVNLDMQDVNLATRTITVIRKGGKKD
VVNIAPFGIPYIERYLEIRKGRYAASDSDKAFFLTTQNKVPARLGTRSVELLVKKLSTAYGKPTTPHKLRHTLATRLYEQ
TKDSLLVSQQLGHKGTAMVEVYAHVAAETTKEALSDL

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=453794 I6I02_RS07705 WP_045772541.1 1686556..1687629(-) (xerS) [Streptococcus salivarius strain FDAARGOS_1045]
ATGAAACAAGAAACACTTATGAAAAACATAAACGAGTTGCTCGAGATTATGCCTTGGTATGTTAAGGAATATTATCAAGC
AAAGCTCGTTATTCCATATAGTTATAAGACGCTGTATGAGTACTTAAAGGAATATAGACGATTTTTTGAATGGTTGATTA
GTGATCATGAGGAATTGGGTAAAACTGTACGTTATGCAGACTATAATACGATTGCTGATGTTCATATTGATGAGCTGGCC
CATTTACCAAAGTCTGTTATTGAAGGCTACTTTGTTTACCTTCGTGAAAATACTGAGCGTCGTTCAATATCTGAAGTCAG
CATTATTCGAACTAAAGATGCCCTCTCTAGTTTGTTTAAGTATCTTACTCAAGAAACTGAGGATGACGAGGGTGAGCCTT
ATTTCTACCGAAATGTCATGGTTAAGGTGAAAATCAAGAAACCTAAAGATACCTTGGCTAGTCGTGCAGATAATATGAAA
GAAAAACTCTTTCTAAACGATACACAGTCTTTCTTGGACTATATCGATAATGAGCATGAAAAGAAAATCTCAAAACGTGC
CCAGGTATCATTTGTCAAAAATAAAGAGCGTGATCTTGCTGTCATAGCACTTCTACTATCTACTGGAGTCCGTTTATCTG
AATTAGTCAACCTAGATATGCAAGATGTCAATCTAGCCACAAGGACGATTACAGTTATTCGAAAAGGTGGAAAAAAGGAC
GTTGTAAATATAGCTCCATTTGGTATACCTTATATCGAGCGTTATTTAGAAATTAGGAAAGGACGCTACGCAGCAAGCGA
TTCAGATAAAGCATTCTTCTTAACGACTCAAAATAAAGTGCCTGCCAGGCTTGGCACACGTTCTGTTGAGCTCTTGGTGA
AGAAGTTATCAACCGCCTATGGGAAACCTACTACTCCTCACAAGCTACGACATACGCTTGCGACACGTCTATATGAGCAA
ACAAAAGACAGTCTCTTAGTATCTCAACAATTGGGACACAAGGGGACTGCAATGGTAGAAGTTTATGCACACGTAGCTGC
AGAAACAACTAAGGAAGCTTTGAGTGATTTGTGA

Domains

Predicted by InterProScan.

Phage integrase family (Phage_integrase)

(182-347)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

53.022

100

0.541