Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   I6I02_RS06810 Genome accession   NZ_CP066093
Coordinates   1500494..1502281 (-) Length   595 a.a.
NCBI ID   WP_198463306.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1495494..1507281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS06780 (I6I02_06780) - 1496108..1496602 (-) 495 WP_198463304.1 DUF6773 family protein -
  I6I02_RS06785 (I6I02_06785) - 1496616..1496813 (-) 198 WP_175061682.1 helix-turn-helix transcriptional regulator -
  I6I02_RS06790 (I6I02_06790) - 1496991..1497974 (-) 984 WP_008534033.1 rhodanese-related sulfurtransferase -
  I6I02_RS06795 (I6I02_06795) - 1498144..1498491 (-) 348 WP_198463305.1 DUF2200 domain-containing protein -
  I6I02_RS06800 (I6I02_06800) - 1498500..1499201 (-) 702 WP_073689831.1 glucosamine-6-phosphate deaminase -
  I6I02_RS06805 (I6I02_06805) queA 1499353..1500396 (+) 1044 WP_073689832.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  I6I02_RS06810 (I6I02_06810) rcrQ 1500494..1502281 (-) 1788 WP_198463306.1 ABC transporter ATP-binding protein Regulator
  I6I02_RS06815 (I6I02_06815) rcrP 1502294..1504030 (-) 1737 WP_037599682.1 ABC transporter ATP-binding protein Regulator
  I6I02_RS06820 (I6I02_06820) - 1504234..1504383 (-) 150 Protein_1349 LysR family transcriptional regulator -
  I6I02_RS06825 (I6I02_06825) - 1504393..1505946 (-) 1554 WP_013990980.1 BCCT family transporter -
  I6I02_RS06830 (I6I02_06830) - 1506174..1506785 (-) 612 WP_037602032.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  I6I02_RS06835 (I6I02_06835) - 1506813..1507028 (-) 216 Protein_1352 CHAP domain-containing protein -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66487.62 Da        Isoelectric Point: 5.1445

>NTDB_id=453784 I6I02_RS06810 WP_198463306.1 1500494..1502281(-) (rcrQ) [Streptococcus salivarius strain FDAARGOS_1045]
MKNNKKKTIHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVIEPVVIGLAITELTKNTLDIIKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTDKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQIV
NAVFTLVLVIGTVLYLNLQLGAIVVVTIPITFFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDKSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=453784 I6I02_RS06810 WP_198463306.1 1500494..1502281(-) (rcrQ) [Streptococcus salivarius strain FDAARGOS_1045]
ATGAAGAATAATAAAAAGAAAACAATTCATTCTTCAAGTTTTGGCCGTCTTTGGTCATACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCCATTTTCTTGAAAATTGTTAGTGTCATCATGAGTGTCATTGAACCTGTAGTCATTGGTTTAGCTATTA
CAGAGCTGACCAAAAATACGCTGGATATCATTAAGGGGGTAGAAGGTGCCCATATCAACGTATCCTATGTTGGTTTGGTT
CTGGTTGTTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCTGCCTACTATTCCAACTATTTCATGACCAATGCTGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACCGATAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TTGGGGACCTCTTGGGCCGCTTTACTAGTGACGTTGAGACAGTATCTAATGCCTTGCAGCAGTCATTCTTGCAGATTGTT
AATGCCGTCTTTACTCTAGTCTTAGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCGTCAC
TATTCCCATTACTTTCTTTGGTGCCCGTTTTATCATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCTCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGTTTCAATGTGCTTAAACTTTTTGGCCGTGAGGATAAATCTTTA
GACGACTTTAAAGAGATTACGGAAGACCTTCAGAAGGTAGGTTTTAAGGCCAATTTCATTTCAGGCCTCATGATGCCTGT
ACTTAATGGTTTATCTGACTTGACCTATCTCATTGTCGCTGTTCTAGGTGGTTTGCAAGTTTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTAGCTGGACAA
TTGCAGAGTGCTAAGTCTTCTTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCTAATGATGCTACTGAAGT
GCTTGAAGGAGATTTGACCGGTCAGGTTAGCTTTAAGCATGTAGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAAGTCAATCCTGGCGAAATGGTCGCTATTGTCGGCCCAACTGGTGCCGGAAAATCAACGATTATCAAT
CTTCTCATGCGTTTCTATGATGTGACTGCAGGTTCTATCTCGGTTGATGGTCATGATATTCGTAACTTATCACGTCAGGA
TTATCGTAAACAGTTTGGGATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGAGGCAACTGATGAAGAAATTGTTGAAGCCGCTAAGGCTGCCAATGTGGACCACTTTATACGTACGCTACCTGGC
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCGAAAATTTTGATTTTGGACGAGGCAACCTCATCAGTTGATACCCGTTTGGAACTCTTGATTCAAAAGG
CTATGAAGACTCTCATGCAGGGTCGCACAAGCTTTGTCATTGCTCACCGTCTGTCAACTATCCAAGAAGCAGACAAGATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTTCTTGCAGATAAAGGCTTCTATTACGATTT
GTATAATAGTCAGTTTGCGGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.929

99.832

0.429