Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6I02_RS06815 Genome accession   NZ_CP066093
Coordinates   1502294..1504030 (-) Length   578 a.a.
NCBI ID   WP_037599682.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_1045     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1497294..1509030
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I02_RS06795 (I6I02_06795) - 1498144..1498491 (-) 348 WP_198463305.1 DUF2200 domain-containing protein -
  I6I02_RS06800 (I6I02_06800) - 1498500..1499201 (-) 702 WP_073689831.1 glucosamine-6-phosphate deaminase -
  I6I02_RS06805 (I6I02_06805) queA 1499353..1500396 (+) 1044 WP_073689832.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  I6I02_RS06810 (I6I02_06810) rcrQ 1500494..1502281 (-) 1788 WP_198463306.1 ABC transporter ATP-binding protein Regulator
  I6I02_RS06815 (I6I02_06815) rcrP 1502294..1504030 (-) 1737 WP_037599682.1 ABC transporter ATP-binding protein Regulator
  I6I02_RS06820 (I6I02_06820) - 1504234..1504383 (-) 150 Protein_1349 LysR family transcriptional regulator -
  I6I02_RS06825 (I6I02_06825) - 1504393..1505946 (-) 1554 WP_013990980.1 BCCT family transporter -
  I6I02_RS06830 (I6I02_06830) - 1506174..1506785 (-) 612 WP_037602032.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  I6I02_RS06835 (I6I02_06835) - 1506813..1507028 (-) 216 Protein_1352 CHAP domain-containing protein -
  I6I02_RS10970 - 1507395..1507652 (-) 258 Protein_1353 type II toxin-antitoxin system Phd/YefM family antitoxin -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64786.64 Da        Isoelectric Point: 5.3001

>NTDB_id=453785 I6I02_RS06815 WP_037599682.1 1502294..1504030(-) (rcrP) [Streptococcus salivarius strain FDAARGOS_1045]
MAYIWSYLRRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDVDKLYAYAWVMFGVVLTGIVGRILLSYAVGKL
TTTMVQVMRNDIYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQATLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALEPLGSGSLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDADQIIVLDEGEIVGRGRHEELMESND
IYREIANSQLNQKSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=453785 I6I02_RS06815 WP_037599682.1 1502294..1504030(-) (rcrP) [Streptococcus salivarius strain FDAARGOS_1045]
ATGGCTTATATTTGGTCTTATCTCAGACGTTATCCTAAGTGGCTAGCAATGAATTTTACGGCAGCCATTTTATTTGTTAT
TGCTAACTTGGGTTTGCCGACGGTTCTTGCCAGAATGATTGATGAGGGAATAAACCGTGGTGATGTTGATAAGCTTTACG
CTTATGCTTGGGTCATGTTTGGTGTAGTTTTGACTGGGATTGTTGGTCGTATACTTCTGTCATATGCGGTTGGTAAGTTG
ACCACTACTATGGTGCAAGTCATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCCCACCACGAGTATGAGCAGAT
TGGGGTATCCTCTTTGGTGACTCGTATCACATCAGATGCTTTTGTGCTTATGCAGTTTGCGGATCAGGTTCTTAAGCTAG
GGGTTATCACTCCTTTGATGATGGTTTCCAGTGTCTTTTTGATTTTGACGACAAGTCCATCTTTGGCTTGGATTGTGGCA
ATCTCCTTGCCTTTCCTAGCCGTAGTAGTCTGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAACAACAGGCAAC
TCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATCCGAGCTTTCGCTAGAGAAGATTTTC
AAGAGAAGAAGTTCGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAATAAACTTTTCAAATTGACTGGTTTGACCGAG
CCACTTTTTGTGCAAATCATCATCGCTATGATTGTGGCAATTGTTTGGTTTGCCCTTGAGCCATTAGGTTCTGGAAGTTT
GGCTATCGGTGACTTGGTTGCCTTTATTGAGTACAGTTTCCATGCACTATTGTCCTTCCTCTTCCTAGCTAACCTTTTTA
CCATGTATCCTCGTACAGCGGTATCTAGTGAACGTCTTCAGGAAATTATGGACATGCCGATTTCTATCAATCCAAATGAA
GATGGTGTGACAGAAACCGAGACTAAGGGATATTTGGAATTTGACAATGTGACCTTTGCCTATCCCGGTGAAACTGAAAG
TCCTGTCCTACACAACATTTCTTTCAAGGCAAAACCTGGTGAAACCATTGCCTTTATTGGGTCTACGGGTTCAGGAAAAT
CGTCACTTGTACAGTTGATTCCACGCTTTTATGATGTAACACTTGGACGCATTCTTGTTGATGGTGTAGATGTCCGTGAC
TACAATCTTAAGGCTCTTCGTCGTAAGATTGGCTTTATTCCACAAAAAGCCCTACTCTTTACAGGGACTATCGGTGAAAA
TATCCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCACTTGGCTGAGGGTGGTAGCAACCTTTCTGGTGGACAGAAGCAGCGTTTGTCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTTTATATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACTGATGC
GACCTTGCGACGTCGTCTAAAAGAAGTGACTCAAGATGCGACAGTCCTGATTGTAGCCCAACGTGTGGGAACTATCATGG
ATGCTGATCAAATCATTGTTTTGGATGAAGGTGAAATCGTTGGTCGTGGCCGTCATGAAGAGCTTATGGAAAGCAATGAC
ATTTACCGTGAAATTGCTAATTCACAATTGAATCAAAAGAGTCTTACGGAAGACTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(17-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.662

92.042

0.365