Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | I33_RS00240 | Genome accession | NC_017195 |
| Coordinates | 44705..44995 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. subtilis str. RO-NN-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39705..49995
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I33_RS00200 (I33_0040) | darA | 39728..40057 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| I33_RS00205 (I33_0041) | yaaR | 40070..40510 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| I33_RS00210 (I33_0042) | holB | 40522..41511 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| I33_RS00215 (I33_0043) | ricT | 41514..42341 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| I33_RS00220 (I33_0044) | yabA | 42356..42715 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| I33_RS00225 (I33_0045) | trmNF | 42774..43517 (+) | 744 | WP_014475566.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| I33_RS00230 (I33_0046) | yazA | 43504..43803 (+) | 300 | WP_014475567.1 | GIY-YIG nuclease family protein | - |
| I33_RS00235 (I33_0047) | rsmI | 43778..44656 (+) | 879 | WP_014475568.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| I33_RS00240 (I33_0048) | abrB | 44705..44995 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| I33_RS00245 (I33_0049) | metG | 45490..47484 (+) | 1995 | WP_014475569.1 | methionine--tRNA ligase | - |
| I33_RS00250 (I33_0050) | dayD | 47564..48331 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| I33_RS00255 (I33_0051) | yabE | 48487..49800 (+) | 1314 | WP_014475571.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=45376 I33_RS00240 WP_003226760.1 44705..44995(-) (abrB) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=45376 I33_RS00240 WP_003226760.1 44705..44995(-) (abrB) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |