Detailed information NTG0453725

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: I6I02_RS00615
• Genome accession: NZ_CP066093
• Coordinates: 116583..119087 (-)
• Length: 834 a.a.
• NCBI ID: WP_155198306.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain FDAARGOS_1045
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 111583..124087

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6I02_RS00585 (I6I02_00585)	-	112869..113099 (-)	231	WP_002884752.1	DNA-dependent RNA polymerase subunit epsilon	-
I6I02_RS00590 (I6I02_00590)	tsaB	113360..114046 (+)	687	WP_155198308.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
I6I02_RS00595 (I6I02_00595)	rimI	114006..114461 (+)	456	WP_037605671.1	ribosomal protein S18-alanine N-acetyltransferase	-
I6I02_RS00600 (I6I02_00600)	tsaD	114461..115474 (+)	1014	WP_037599075.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
I6I02_RS00605 (I6I02_00605)	-	115526..116218 (+)	693	WP_037598483.1	AzlC family ABC transporter permease	-
I6I02_RS00610 (I6I02_00610)	-	116205..116531 (+)	327	WP_155198307.1	AzlD domain-containing protein	-
I6I02_RS00615 (I6I02_00615)	recD/recD2/recDB	116583..119087 (-)	2505	WP_155198306.1	ATP-dependent RecD-like DNA helicase	Machinery gene
I6I02_RS00620 (I6I02_00620)	lepB	119148..119771 (-)	624	WP_013991198.1	signal peptidase I	-
I6I02_RS00625 (I6I02_00625)	rnhC	119790..120680 (-)	891	WP_060972421.1	ribonuclease HIII	-
I6I02_RS00630 (I6I02_00630)	zapA	120997..121311 (+)	315	WP_004183554.1	cell division protein ZapA	-
I6I02_RS00635 (I6I02_00635)	-	121308..121850 (+)	543	WP_070654666.1	CvpA family protein	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 93656.91 Da
• Isoelectric Point: 4.4476

>NTDB_id=453725 I6I02_RS00615 WP_155198306.1 116583..119087(-) (recD/recD2/recDB) [Streptococcus salivarius strain FDAARGOS_1045]
MQEFYFSGTIERVIFENTSNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWGQLTNHPKYGEQLQMTRYERS
KPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDKILEDPSELEQIPNLSKVNREAFVAKLKINYGAEQILSKLSSY
GLTPKAASQIFNQYKEESLNLIEEHPYLLVEEIQGIGFKMADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KALLERTIILLEGARPIELDPALVANQLTNLIQEDKVQNVETKIFDNTLYFAEQGIYTHLTRIMKDQPDVSSEDKILDSL
EGVEEELGITYDQVQKDAIIKALQSKVFILTGGPGTGKTTVINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRMNEL
TQLPSATIHRHLGLNSEDDFKTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVIIVGDQDQLPSVGPGQVLADLL
QIDSLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEANANHIPQMVPKIVSAAIKSGIAAQDVQILA
PMYRGQAGINNLNTIMQDLLNPKEKANQFAFNDIFFRKNDKILHLVNDTELNVFNGDIGIITDLIPGKYTESKQDEIYMS
FDGNEVIYPRNEWSKITLAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFNYAVHNEG
AKRNTYLIQRFEQTYTQAVDKSVEKIVKNEATDASNQTKKENNGSSEPLENKDISGNINPSPALINTYSQPVDKSVNKPV
QTEENYRLTEDNWSTIDPMIGLSEDDIAAFFNNN

Nucleotide

• Length: 2505 bp

>NTDB_id=453725 I6I02_RS00615 WP_155198306.1 116583..119087(-) (recD/recD2/recDB) [Streptococcus salivarius strain FDAARGOS_1045]
ATGCAAGAATTTTATTTTTCAGGAACTATCGAACGCGTCATTTTCGAAAACACTAGTAATTTTTTTCGTATCTTACTCTT
AGAGATTGACGAAACGGACAGTGATTTTGAAGACTACGAAATCATTGTCACAGGAACTATGGGGGATGTCATGGAGGGTG
AAGACTATACCTTCTGGGGCCAACTAACCAATCACCCTAAATACGGGGAACAGCTACAAATGACCCGCTACGAGCGTTCA
AAACCTTCTGCTAGCGGTCTTATCAAATATTTTGCCAGCGACAATTTCAAAGGAATCGGTAAGAAAACGGCCGAGCGTAT
TGTCGAAATTTACGGAGAAGACCCTATTGACAAGATTCTCGAGGATCCTAGCGAGTTAGAGCAGATCCCCAACCTCTCCA
AGGTCAATCGAGAAGCCTTTGTTGCTAAGTTAAAAATCAATTATGGAGCCGAGCAAATCCTGTCCAAACTTTCTAGCTAT
GGACTCACACCAAAGGCCGCCTCACAAATTTTCAACCAATATAAGGAAGAGTCACTAAATCTTATTGAGGAACACCCTTA
TCTATTAGTAGAGGAGATTCAAGGAATCGGTTTTAAAATGGCTGACCAACTAGCTGAACGTCTTGGAATTGCTAGTGATG
CTCCTGAGCGTTTACGAGCTGCCTTGATTCATTGTCTACTAGAAGCCAGTATGGAAGAAGGCGATACCTACATAGAAGCC
AAAGCCTTGCTTGAACGGACCATCATTCTTTTGGAAGGTGCTCGTCCGATTGAACTTGACCCCGCCTTGGTCGCTAACCA
ATTAACCAATCTTATCCAAGAGGATAAGGTGCAAAATGTAGAGACTAAAATCTTTGATAATACCCTATATTTTGCGGAAC
AGGGCATCTATACCCACCTAACTCGTATCATGAAGGACCAACCTGACGTCAGCTCTGAAGACAAAATCTTAGACAGCCTT
GAAGGGGTGGAAGAGGAGCTTGGTATTACTTATGATCAGGTTCAAAAAGATGCCATTATCAAAGCCCTACAAAGCAAGGT
CTTCATCCTGACAGGGGGCCCCGGAACAGGGAAAACCACTGTTATTAACGGCATTATTAAAACCTATGCTGACCTTCATG
GCCTAGATCTCAAAAAGTCTGATTTACCTATTATTTTAGCAGCACCAACGGGACGGGCTGCTCGTCGGATGAACGAACTC
ACCCAACTCCCTAGCGCCACTATTCATAGACATTTAGGCCTCAATAGCGAGGACGATTTTAAGACCTTAGAGGATTATCT
CGATTGCGATTTGATTATCATCGACGAGTTCTCTATGGTTGATACTTGGTTGGCCAATCAACTCTTTGAAAGTATCTCTG
ACTCAACCCAAGTCATCATTGTAGGGGACCAAGACCAACTGCCTTCCGTAGGCCCTGGCCAAGTCTTGGCTGACCTTTTG
CAGATTGATAGCTTACCTAAGGTCTCCCTAACCAAAATTTTCAGACAATCAGAGGATTCCACTATCGTTACCCTAGCTAG
TCAGATGCGCCAAGGCCAACTACCAGCTGATTTCACAGAGAAAAAGGCTGACCGCTCTTACTTTGAGGCCAATGCCAACC
ATATTCCACAGATGGTTCCTAAAATCGTCTCTGCTGCGATAAAGAGTGGGATTGCAGCTCAGGATGTTCAGATTCTAGCC
CCCATGTACCGAGGACAGGCTGGTATTAACAATCTCAATACCATTATGCAAGACCTACTTAATCCTAAAGAAAAGGCCAA
TCAGTTCGCCTTTAATGATATCTTCTTCCGCAAGAATGACAAGATTCTCCATCTGGTCAACGATACAGAACTCAATGTCT
TCAATGGCGACATCGGAATCATTACTGATCTCATCCCTGGTAAATATACTGAAAGCAAGCAGGACGAAATTTACATGTCC
TTCGATGGCAATGAAGTTATCTATCCTCGTAACGAATGGAGTAAGATTACTCTGGCCTATGCCATGTCAATCCATAAATC
CCAAGGAAGTGAATTCCCAGTCGTTATCCTTCCCATCACACGCCAAAGTGGACGTATGCTACAACGTAACCTCATTTACA
CCGCAATCACACGCGCCAAGAGTAAACTAGTCATGCTGGGGGAAATCGCAGCCTTCAATTATGCTGTTCACAACGAGGGG
GCTAAACGAAATACCTATCTCATCCAACGTTTTGAACAAACTTATACACAAGCTGTTGATAAGTCTGTAGAAAAGATTGT
TAAAAACGAGGCAACAGACGCATCCAATCAAACCAAAAAGGAAAACAACGGATCCTCAGAACCCCTTGAAAACAAAGACA
TTTCGGGAAATATAAATCCATCTCCAGCTCTTATTAACACTTATTCACAACCTGTGGATAAGTCTGTTAACAAACCTGTG
CAAACCGAAGAAAACTATCGTTTAACGGAAGATAATTGGTCAACTATAGATCCAATGATTGGTCTCAGTGAAGACGATAT
TGCTGCCTTTTTTAACAATAACTAA

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-638)

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

• AAA domain (AAA_30) (331-523)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	45.114	89.568	0.404