Detailed information    

insolico Bioinformatically predicted

Overview

Name   irvR   Type   Regulator
Locus tag   I6H73_RS10325 Genome accession   NZ_CP066073
Coordinates   2069854..2070621 (-) Length   255 a.a.
NCBI ID   WP_003058809.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1016     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2064854..2075621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H73_RS10310 (I6H73_10310) - 2066111..2067262 (-) 1152 WP_003058754.1 site-specific integrase -
  I6H73_RS10315 (I6H73_10315) - 2067599..2068564 (-) 966 WP_065354783.1 DUF3644 domain-containing protein -
  I6H73_RS10320 (I6H73_10320) rhuM 2068724..2068828 (-) 105 Protein_2040 RhuM family protein -
  I6H73_RS10325 (I6H73_10325) irvR 2069854..2070621 (-) 768 WP_003058809.1 S24 family peptidase Regulator
  I6H73_RS10330 (I6H73_10330) - 2070775..2070981 (+) 207 WP_002992503.1 helix-turn-helix transcriptional regulator -
  I6H73_RS10335 (I6H73_10335) - 2071015..2071755 (+) 741 WP_100206409.1 Bro-N domain-containing protein -
  I6H73_RS10340 (I6H73_10340) - 2071765..2072376 (+) 612 WP_003058769.1 phage repressor protein -
  I6H73_RS10345 (I6H73_10345) - 2072397..2072804 (+) 408 WP_002992501.1 hypothetical protein -
  I6H73_RS10350 (I6H73_10350) - 2072817..2073149 (+) 333 WP_050814422.1 hypothetical protein -
  I6H73_RS10355 (I6H73_10355) - 2073405..2073746 (+) 342 WP_037588219.1 hypothetical protein -
  I6H73_RS10360 (I6H73_10360) - 2073733..2073954 (+) 222 WP_003058793.1 hypothetical protein -
  I6H73_RS10365 (I6H73_10365) - 2073957..2074148 (+) 192 WP_003058790.1 hypothetical protein -
  I6H73_RS10370 (I6H73_10370) - 2074160..2074489 (+) 330 WP_003058810.1 hypothetical protein -
  I6H73_RS10375 (I6H73_10375) - 2074492..2074764 (+) 273 WP_001100459.1 hypothetical protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 28725.00 Da        Isoelectric Point: 4.3544

>NTDB_id=453702 I6H73_RS10325 WP_003058809.1 2069854..2070621(-) (irvR) [Streptococcus dysgalactiae strain FDAARGOS_1016]
MAKNSPQDLINREIFSTNLNMLMAKKNIKQIDIHNKLGIPKSTITGYVKGRSLPTAGNVQKLADFFGVLKSDIDPRFDSN
NIETNSNIIPSTLQKVTSTLSQLEHKRQLNVLDYAETQLEQQNTVEEPQATYYTYNYYDHAASAGTGQYLNDVQVETIEL
PVDYDADFVIPVYGDSMEPEYHSGDYVFIKLSINLSDGDIGVFEYYGDAYIKQLVINDSGAFLHSLNDKYDDILIDRDSD
FRIIGEVIGSFTSKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=453702 I6H73_RS10325 WP_003058809.1 2069854..2070621(-) (irvR) [Streptococcus dysgalactiae strain FDAARGOS_1016]
ATGGCTAAAAATAGTCCCCAAGATTTAATAAATAGAGAAATTTTCTCAACAAATCTCAACATGCTTATGGCTAAAAAGAA
TATCAAACAGATAGATATTCACAACAAACTAGGAATACCTAAGAGTACGATAACTGGCTATGTTAAAGGTCGTTCACTCC
CAACTGCTGGAAACGTTCAAAAGCTGGCGGACTTCTTCGGAGTTTTAAAATCAGACATTGACCCCCGTTTTGATTCTAAT
AATATTGAAACAAATAGTAATATTATCCCATCAACCCTACAAAAAGTAACATCTACTTTATCTCAGCTAGAACACAAGCG
ACAATTAAACGTCCTTGATTATGCTGAAACACAATTAGAACAACAAAACACAGTAGAAGAACCACAAGCCACCTACTACA
CTTACAATTACTACGACCACGCAGCTTCAGCTGGTACAGGTCAGTATCTAAATGATGTACAAGTAGAAACAATTGAATTA
CCAGTCGATTACGACGCTGATTTTGTCATACCGGTTTATGGCGATTCTATGGAACCCGAATACCATTCTGGGGACTATGT
ATTTATCAAACTATCTATTAACCTGTCAGATGGTGATATAGGAGTTTTTGAGTATTACGGTGATGCTTATATCAAACAAC
TTGTTATAAACGATTCTGGAGCATTTCTGCATAGTCTGAACGACAAGTATGACGATATACTCATAGATAGAGATAGTGAT
TTCCGTATTATCGGAGAAGTTATTGGGAGTTTTACATCTAAATCATGA

Domains

Predicted by InterProScan.

Helix-turn-helix (HTH_3)

(23-68)

Peptidase S24-like (Peptidase_S24)

(141-248)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

34

100

0.4