Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   A7A1_RS03360 Genome accession   NC_019896
Coordinates   657891..658604 (+) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis subsp. subtilis str. BSP1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 652891..663604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7A1_RS03325 (A7A1_2698) rppI 653137..653613 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  A7A1_RS03330 (A7A1_2697) rapZ 653638..654525 (+) 888 WP_003243903.1 RNase adapter RapZ -
  A7A1_RS03335 (A7A1_2696) mgfK 654527..655480 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  A7A1_RS03340 (A7A1_2695) whiA 655503..656453 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  A7A1_RS03345 (A7A1_2694) crh 656477..656734 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  A7A1_RS03350 (A7A1_2693) yvcN 656735..657499 (+) 765 WP_015251150.1 arylamine N-acetyltransferase -
  A7A1_RS03355 - 657535..657744 (-) 210 WP_029318346.1 hypothetical protein -
  A7A1_RS03360 (A7A1_2692) braR 657891..658604 (+) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  A7A1_RS03365 (A7A1_2691) psdS 658598..659668 (+) 1071 WP_015251151.1 two-component sensor histidine kinase PsdS -
  A7A1_RS03370 (A7A1_2690) psdA 659751..660530 (+) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  A7A1_RS03375 (A7A1_2689) psdB 660505..662445 (+) 1941 WP_015251152.1 lantibiotic ABC transporter permease PsdB -
  A7A1_RS03380 (A7A1_2688) ghrB 662483..663460 (-) 978 WP_015251153.1 D-glycerate dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=45369 A7A1_RS03360 WP_003244535.1 657891..658604(+) (braR) [Bacillus subtilis subsp. subtilis str. BSP1]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=45369 A7A1_RS03360 WP_003244535.1 657891..658604(+) (braR) [Bacillus subtilis subsp. subtilis str. BSP1]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment