Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   I6H73_RS07220 Genome accession   NZ_CP066073
Coordinates   1431336..1431998 (-) Length   220 a.a.
NCBI ID   WP_003057999.1    Uniprot ID   A0ABU0A4Z4
Organism   Streptococcus dysgalactiae strain FDAARGOS_1016     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1426336..1436998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H73_RS07200 (I6H73_07200) - 1427808..1428176 (-) 369 WP_003057106.1 metalloregulator ArsR/SmtB family transcription factor -
  I6H73_RS07205 (I6H73_07205) - 1428379..1428543 (+) 165 Protein_1427 DUF5960 family protein -
  I6H73_RS11760 - 1428530..1428760 (-) 231 Protein_1428 recombinase family protein -
  I6H73_RS07210 (I6H73_07210) - 1428888..1429523 (-) 636 WP_115261962.1 CpXC domain-containing protein -
  I6H73_RS07215 (I6H73_07215) - 1429676..1431355 (-) 1680 Protein_1430 ComEC/Rec2 family competence protein -
  I6H73_RS07220 (I6H73_07220) comEA 1431336..1431998 (-) 663 WP_003057999.1 helix-hairpin-helix domain-containing protein Machinery gene
  I6H73_RS07225 (I6H73_07225) - 1432395..1433135 (-) 741 WP_003057989.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  I6H73_RS07230 (I6H73_07230) - 1433253..1434029 (+) 777 WP_100206406.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  I6H73_RS07235 (I6H73_07235) - 1434019..1434297 (+) 279 WP_003057969.1 GIY-YIG nuclease family protein -
  I6H73_RS07240 (I6H73_07240) - 1434321..1436321 (-) 2001 WP_003057979.1 potassium transporter Kup -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 24080.46 Da        Isoelectric Point: 5.8872

>NTDB_id=453667 I6H73_RS07220 WP_003057999.1 1431336..1431998(-) (comEA) [Streptococcus dysgalactiae strain FDAARGOS_1016]
MIDDLLTKGTNSLKKVYSLPRLIGVVLAIFLILTLSFVIWGKEQSQTKLPIVSTSSSIQQPASEEKKYSSEESNILVDLK
GAVQQEGVYKLRANSRVRDVIELAGGLTQEADRHAVNFAEKLVDEQVVYVAKQGEDISVLPNASSAGKANAEMSNSTKVN
INKANLEELQRISGIGVKRAQDILETRDSLGGFKTLDDLRQVSGIGEKTLEKLKHELSLD

Nucleotide


Download         Length: 663 bp        

>NTDB_id=453667 I6H73_RS07220 WP_003057999.1 1431336..1431998(-) (comEA) [Streptococcus dysgalactiae strain FDAARGOS_1016]
ATGATAGATGACTTGTTAACTAAAGGAACAAATAGCTTGAAAAAGGTTTATTCTCTGCCACGCTTGATTGGTGTTGTGCT
AGCCATTTTTCTGATACTAACCCTAAGTTTTGTTATCTGGGGAAAAGAGCAGAGCCAAACAAAACTTCCTATTGTATCAA
CTTCTTCTTCCATACAACAGCCAGCTAGTGAGGAAAAAAAGTATTCTTCAGAAGAGAGTAATATTTTAGTGGATTTAAAA
GGAGCCGTACAACAGGAGGGAGTTTATAAGCTCAGGGCTAATAGCCGTGTGCGCGATGTCATTGAATTAGCTGGGGGACT
TACTCAGGAAGCTGATAGACATGCTGTTAATTTTGCAGAAAAACTGGTGGATGAGCAGGTTGTGTATGTGGCTAAGCAGG
GTGAAGACATTTCTGTCTTGCCAAATGCCTCCTCAGCAGGTAAAGCTAACGCAGAAATGTCTAACTCAACAAAGGTGAAT
ATCAATAAGGCAAATTTAGAGGAGTTACAACGTATTTCGGGCATTGGTGTAAAAAGGGCTCAGGATATTCTTGAGACGAG
AGACAGTCTAGGTGGCTTTAAAACGTTAGATGATCTTAGACAGGTATCTGGAATTGGTGAAAAAACACTTGAGAAATTGA
AACATGAACTATCGTTGGACTAA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(77-129)

Helix-hairpin-helix motif (HHH_3)

(155-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Bacillus subtilis subsp. subtilis str. 168

38.389

95.909

0.368