Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   I6H73_RS06220 Genome accession   NZ_CP066073
Coordinates   1225281..1225760 (-) Length   159 a.a.
NCBI ID   WP_003058929.1    Uniprot ID   A0ABU0AAE0
Organism   Streptococcus dysgalactiae strain FDAARGOS_1016     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1220281..1230760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H73_RS06200 (I6H73_06200) - 1220580..1220921 (-) 342 WP_003054176.1 hypothetical protein -
  I6H73_RS06205 (I6H73_06205) - 1221099..1222751 (+) 1653 WP_015057668.1 NFACT family protein -
  I6H73_RS06210 (I6H73_06210) - 1222814..1224061 (-) 1248 WP_003054178.1 CDC27 family protein -
  I6H73_RS06215 (I6H73_06215) - 1224051..1225232 (-) 1182 WP_003059678.1 AI-2E family transporter -
  I6H73_RS06220 (I6H73_06220) mutX 1225281..1225760 (-) 480 WP_003058929.1 8-oxo-dGTP diphosphatase Machinery gene
  I6H73_RS06225 (I6H73_06225) - 1225956..1226147 (+) 192 WP_003058922.1 hypothetical protein -
  I6H73_RS06230 (I6H73_06230) - 1226235..1226603 (-) 369 WP_227985721.1 CPBP family intramembrane glutamic endopeptidase -
  I6H73_RS06235 (I6H73_06235) - 1226566..1226931 (-) 366 WP_003060933.1 hypothetical protein -
  I6H73_RS06240 (I6H73_06240) rfbB 1227120..1228163 (-) 1044 WP_003057682.1 dTDP-glucose 4,6-dehydratase -
  I6H73_RS06245 (I6H73_06245) - 1228407..1229000 (-) 594 WP_003057688.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  I6H73_RS06250 (I6H73_06250) rfbA 1229000..1229869 (-) 870 WP_003057684.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18574.75 Da        Isoelectric Point: 4.2471

>NTDB_id=453661 I6H73_RS06220 WP_003058929.1 1225281..1225760(-) (mutX) [Streptococcus dysgalactiae strain FDAARGOS_1016]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=453661 I6H73_RS06220 WP_003058929.1 1225281..1225760(-) (mutX) [Streptococcus dysgalactiae strain FDAARGOS_1016]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGAGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686