Detailed information NTG0045358

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BAXH7_RS18295
• Genome accession: NC_017191
• Coordinates: 3599253..3600398 (+)
• Length: 381 a.a.
• NCBI ID: WP_013353955.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens XH7
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3594253..3605398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAXH7_RS18275 (BAXH7_03869)	argS	3594916..3596586 (-)	1671	WP_013353950.1	arginine--tRNA ligase	-
BAXH7_RS18280 (BAXH7_03870)	-	3596583..3597011 (-)	429	WP_013353951.1	DUF1934 domain-containing protein	-
BAXH7_RS21310	-	3597165..3597624 (+)	460	Protein_3654	bacteriocin biosynthesis protein AlbG	-
BAXH7_RS18290 (BAXH7_03872)	-	3597630..3599024 (-)	1395	WP_014471165.1	YncE family protein	-
BAXH7_RS18295 (BAXH7_03873)	rapF	3599253..3600398 (+)	1146	WP_013353955.1	tetratricopeptide repeat protein	Regulator
BAXH7_RS18300 (BAXH7_03874)	phrF	3600382..3600501 (+)	120	WP_014471166.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BAXH7_RS18305 (BAXH7_03875)	speB	3600615..3601487 (-)	873	WP_013353956.1	agmatinase	-
BAXH7_RS18310 (BAXH7_03876)	speE	3601546..3602376 (-)	831	WP_013353957.1	spermidine synthase	-
BAXH7_RS18315 (BAXH7_03877)	-	3602576..3604648 (+)	2073	WP_013353958.1	transglycosylase domain-containing protein	-
BAXH7_RS18320 (BAXH7_03878)	-	3604673..3605104 (-)	432	WP_013353959.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45480.54 Da
• Isoelectric Point: 4.6393

>NTDB_id=45358 BAXH7_RS18295 WP_013353955.1 3599253..3600398(+) (rapF) [Bacillus amyloliquefaciens XH7]
MASVVSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELASLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVTDQIEKAEFYFKMSESYYYMKQTYFS
MDYARQAYKIYHKQEAYNIRVLQCHSLFATNFLDLKQYDEAIQHFKKAYAMAEAEQQPQLMGRTLYNIGLCFNSQENYKP
AIDYIKRAIAVFEDGNIITSLPQAYFLITQIHYKIGNMAIARQYHDKGVSYAKEAEDSLYIAEYEFLESLYVGEPDEEAI
MECFDFLKDKLMYADLEDFALDVAKYYHERENFEKASAYFLKVEETRQQIQGGVKLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=45358 BAXH7_RS18295 WP_013353955.1 3599253..3600398(+) (rapF) [Bacillus amyloliquefaciens XH7]
GTGGCGAGTGTTGTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAAGCCTGGAAGATGACCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTGGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGCCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAATTGACGTACG
TTACAGATCAGATAGAAAAAGCGGAATTTTACTTTAAGATGTCAGAGTCCTACTATTATATGAAGCAGACTTATTTTTCT
ATGGATTATGCCCGGCAGGCTTATAAAATTTATCATAAGCAGGAGGCATATAATATAAGGGTGCTTCAGTGCCATTCATT
GTTCGCTACCAACTTTCTTGACTTAAAGCAATATGATGAAGCAATTCAGCATTTTAAAAAAGCTTATGCCATGGCAGAGG
CAGAACAGCAGCCTCAATTAATGGGCCGGACTCTATATAATATCGGGCTTTGTTTTAACAGCCAAGAAAATTACAAACCA
GCCATTGACTACATCAAACGGGCAATAGCTGTTTTTGAAGATGGGAACATCATCACTTCTCTTCCGCAAGCCTATTTCTT
AATCACACAAATACATTATAAAATCGGAAATATGGCCATAGCCAGGCAATATCATGACAAAGGAGTATCTTACGCGAAGG
AGGCGGAAGATTCATTATATATAGCGGAGTATGAATTTTTAGAATCTTTGTACGTCGGTGAGCCTGATGAAGAAGCAATT
ATGGAATGTTTTGACTTCCTCAAGGATAAATTGATGTATGCTGATCTTGAAGATTTTGCCTTAGATGTGGCAAAATATTA
CCACGAGAGAGAAAATTTCGAGAAGGCTTCCGCATATTTTTTAAAAGTGGAAGAAACAAGACAGCAAATTCAAGGAGGTG
TGAAGTTGTATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (189-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	78.215	100	0.782
rapC	Bacillus subtilis subsp. subtilis str. 168	56.842	99.738	0.567