Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   I6H74_RS07865 Genome accession   NZ_CP066069
Coordinates   1608870..1609349 (-) Length   159 a.a.
NCBI ID   WP_115256847.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1017     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1603870..1614349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H74_RS07845 (I6H74_07840) - 1604169..1604510 (-) 342 WP_003054176.1 hypothetical protein -
  I6H74_RS07850 (I6H74_07845) - 1604688..1606340 (+) 1653 WP_046177095.1 NFACT family protein -
  I6H74_RS07855 (I6H74_07850) - 1606403..1607650 (-) 1248 WP_046177096.1 CDC27 family protein -
  I6H74_RS07860 (I6H74_07855) - 1607640..1608821 (-) 1182 WP_003059678.1 AI-2E family transporter -
  I6H74_RS07865 (I6H74_07860) mutX 1608870..1609349 (-) 480 WP_115256847.1 8-oxo-dGTP diphosphatase Machinery gene
  I6H74_RS07870 (I6H74_07865) - 1609545..1609736 (+) 192 WP_003058922.1 hypothetical protein -
  I6H74_RS07875 (I6H74_07870) - 1609824..1610192 (-) 369 WP_227985721.1 CPBP family intramembrane glutamic endopeptidase -
  I6H74_RS07880 (I6H74_07875) - 1610155..1610520 (-) 366 WP_003060933.1 hypothetical protein -
  I6H74_RS07885 (I6H74_07880) rfbB 1610709..1611752 (-) 1044 WP_046177097.1 dTDP-glucose 4,6-dehydratase -
  I6H74_RS07890 (I6H74_07885) - 1611996..1612589 (-) 594 WP_002990099.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  I6H74_RS07895 (I6H74_07890) rfbA 1612589..1613458 (-) 870 WP_046177098.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18556.72 Da        Isoelectric Point: 4.2471

>NTDB_id=453574 I6H74_RS07865 WP_115256847.1 1608870..1609349(-) (mutX) [Streptococcus dysgalactiae strain FDAARGOS_1017]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEIAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=453574 I6H74_RS07865 WP_115256847.1 1608870..1609349(-) (mutX) [Streptococcus dysgalactiae strain FDAARGOS_1017]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGAGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATAGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686