Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   FOC72_RS06580 Genome accession   NZ_CP054570
Coordinates   1386125..1387927 (-) Length   600 a.a.
NCBI ID   WP_002896043.1    Uniprot ID   A0A859EPX4
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1381125..1392927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS06565 (FOC72_06565) - 1383597..1384178 (-) 582 WP_002896038.1 LURP-one-related/scramblase family protein -
  FOC72_RS06570 (FOC72_06570) prsA 1384319..1385326 (-) 1008 WP_002896039.1 peptidylprolyl isomerase PrsA -
  FOC72_RS06575 (FOC72_06575) - 1385440..1386123 (-) 684 WP_002896041.1 O-methyltransferase -
  FOC72_RS06580 (FOC72_06580) pepF 1386125..1387927 (-) 1803 WP_002896043.1 oligoendopeptidase F Regulator
  FOC72_RS06585 (FOC72_06585) - 1388091..1388399 (-) 309 WP_002896048.1 hypothetical protein -
  FOC72_RS06590 (FOC72_06590) - 1388435..1388809 (-) 375 WP_002896050.1 hypothetical protein -
  FOC72_RS06595 (FOC72_06595) - 1388806..1390395 (-) 1590 WP_002896052.1 hypothetical protein -
  FOC72_RS06600 (FOC72_06600) - 1390397..1390783 (-) 387 WP_032914211.1 DUF1310 family protein -
  FOC72_RS06605 (FOC72_06605) - 1390951..1391337 (-) 387 WP_002896055.1 DUF1310 family protein -
  FOC72_RS06610 (FOC72_06610) - 1391664..1392051 (-) 388 Protein_1302 DUF1310 family protein -
  FOC72_RS06615 (FOC72_06615) - 1392204..1392611 (-) 408 WP_002896057.1 DUF1310 family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69175.19 Da        Isoelectric Point: 4.5723

>NTDB_id=453501 FOC72_RS06580 WP_002896043.1 1386125..1387927(-) (pepF) [Streptococcus sanguinis strain FDAARGOS_770]
MAKQRNEIEEKYTWDLSTIFPTDEAFEAELAQVSEEVKKAASLAGHLLDSADSLLTTTEIQLDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMTLYSNFGQSFAFYEPEFMAITEEQYQAFLAEQQALQQYQHYFDKLLKKKAHILTQREEELLAGA
GEIFGAAGETFAILDNADIVFPMVHDEDGNEVQLSHGNYITLVESKNREVRKEAYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRKFSSAREAALSADFIPESVYDSLVSAVNKHLPLLQRYIALRAKILGISDLKMYDMYTPLSETDYKFTYEEALA
KSEEVLAILGEDYLSRVKTAFSERWIDVHENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVEDDATRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNELYADLNEKYYGLKKEDNPQIQYEWARIPHFYYDYYVFQYSTGFSAASALAEKIVHGSQEDKDKYLDYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=453501 FOC72_RS06580 WP_002896043.1 1386125..1387927(-) (pepF) [Streptococcus sanguinis strain FDAARGOS_770]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATATACTTGGGATTTGAGTACTATTTTCCCAACAGATGAAGCCTTTGA
AGCGGAGTTAGCGCAGGTTTCAGAAGAAGTGAAGAAAGCAGCTAGTCTAGCTGGACATTTGTTGGATTCAGCGGACAGTC
TCTTAACAACGACTGAAATCCAGCTGGACTTGATGCGTCGTATTGAAAAGCTTTATTCTTATGCTCATATGAAGAATGAC
CAGGATACACGTGTGGCTAAGTACCAAGAGTATCAGGCTAAAGGCATGACTCTATATAGCAACTTTGGTCAAAGCTTTGC
TTTCTATGAGCCAGAATTTATGGCGATTACAGAAGAGCAGTACCAAGCTTTCTTGGCTGAGCAGCAAGCCTTGCAGCAGT
ATCAGCATTATTTTGACAAGCTTTTGAAAAAGAAAGCCCACATCCTGACACAACGTGAAGAGGAGCTATTGGCCGGTGCT
GGTGAAATTTTTGGTGCAGCGGGCGAAACCTTTGCTATCTTGGATAATGCAGATATCGTCTTTCCGATGGTGCATGACGA
AGATGGAAATGAAGTTCAGCTCAGCCACGGTAACTATATCACCTTGGTCGAGTCTAAGAACCGAGAGGTCCGTAAGGAAG
CTTATGAAGCACTTTATAGCGTATACGAGCAGTATCAGCATACCTACGCTAAGACTCTGCAGACCAATGTCAAGGTTCAC
AATTACAATGCGAAAGTCCGCAAGTTTTCATCTGCCCGCGAAGCGGCCTTGTCAGCGGACTTCATTCCAGAAAGTGTTTA
TGACAGCCTAGTTTCAGCTGTCAATAAGCATTTGCCTCTTTTGCAGCGTTATATCGCTTTGCGAGCGAAGATTTTAGGAA
TTTCTGATTTGAAGATGTATGATATGTACACTCCTTTGTCAGAGACAGACTATAAATTCACTTATGAGGAAGCCTTGGCT
AAGTCTGAGGAAGTTTTGGCTATTCTGGGTGAGGATTATTTGAGCCGAGTGAAGACAGCTTTTTCAGAGCGATGGATTGA
TGTTCATGAAAATCAAGGCAAGCGCTCAGGGGCATACTCTGGCGGTTCTTATGACACCAACGCCTTTATGTTGCTCAACT
GGCAGGACACGCTGGATAATCTCTTTACCTTGGTGCACGAGACAGGCCACAGTATGCACTCCAGCTACACCCGTGAGACC
CAGCCTTATGTCTATGGAGACTATTCTATCTTCCTAGCTGAGATTGCTTCGACGACTAATGAAAACATCCTGACAGAGAA
GCTCTTGGAAGAAGTAGAAGACGATGCTACCCGCTTTGCTATTCTCAACCACTTTTTGGACGGCTTTAGAGGTACGGTCT
TCCGTCAAACCCAGTTTGCTGAGTTTGAGCACGCTATCCACAAGGCTGACCAAGAAGGGCAAGTTTTGACCAGCGAGTTT
CTCAATGAGCTCTATGCTGACTTGAACGAGAAATACTATGGACTGAAAAAAGAAGATAATCCACAGATTCAGTACGAATG
GGCTCGGATTCCTCATTTCTACTATGATTACTATGTTTTCCAATATTCGACAGGATTTTCAGCGGCTTCTGCCTTGGCTG
AAAAGATTGTCCATGGCAGTCAGGAAGACAAGGATAAGTATCTGGACTATCTCAAAGCTGGGAACTCTGACTACCCACTC
AATGTCATCAAAAAAGCAGGTGTGGATATGGAGAAAGAAGACTACCTAAATGCTGCTTTTGCTGTTTTTGAGCGTCGTCT
GGATGAATTCGAAGCCTTGGTAGAAAAGTTGGGACTGGCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A859EPX4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

68.456

99.333

0.68