Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   A7A1_RS00055 Genome accession   NC_019896
Coordinates   9204..10052 (+) Length   282 a.a.
NCBI ID   WP_015250780.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. BSP1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4204..15052
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7A1_RS00035 (A7A1_1283) rsmG 6018..6737 (+) 720 WP_015250777.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  A7A1_RS00040 (A7A1_1282) noc 6859..7710 (+) 852 WP_015250778.1 nucleoid occlusion protein -
  A7A1_RS00045 (A7A1_1281) yyaB 7761..8201 (-) 441 WP_015250779.1 PH domain-containing protein -
  A7A1_RS00050 (A7A1_1280) soj 8450..9211 (+) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  A7A1_RS00055 (A7A1_1279) spo0J 9204..10052 (+) 849 WP_015250780.1 stage 0 sporulation protein Spo0J Regulator
  A7A1_RS00060 yyaC 10091..10708 (-) 618 WP_003226834.1 spore protease YyaC -
  A7A1_RS00065 - 11151..12168 (+) 1018 Protein_12 hypothetical protein -
  A7A1_RS00070 yyzM 12262..12469 (+) 208 Protein_13 DUF951 domain-containing protein -
  A7A1_RS00075 (A7A1_3849) yyaE 12520..14523 (+) 2004 WP_044052400.1 molybdopterin-dependent oxidoreductase -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32180.18 Da        Isoelectric Point: 9.1395

>NTDB_id=45349 A7A1_RS00055 WP_015250780.1 9204..10052(+) (spo0J) [Bacillus subtilis subsp. subtilis str. BSP1]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDVALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=45349 A7A1_RS00055 WP_015250780.1 9204..10052(+) (spo0J) [Bacillus subtilis subsp. subtilis str. BSP1]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGTGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCAAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAACAGCTTATTGCCGAAGGCACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(24-112)

HTH domain found in ParB protein (HTH_ParB)

(163-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387

Multiple sequence alignment