Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   FOC72_RS02035 Genome accession   NZ_CP054570
Coordinates   408143..408856 (-) Length   237 a.a.
NCBI ID   WP_032914063.1    Uniprot ID   A0A8B6N1G4
Organism   Streptococcus sanguinis strain FDAARGOS_770     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 403143..413856
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC72_RS02020 (FOC72_02020) - 404291..405085 (-) 795 WP_002894635.1 ABC transporter ATP-binding protein -
  FOC72_RS02025 (FOC72_02025) - 405160..406284 (+) 1125 WP_002894636.1 AI-2E family transporter -
  FOC72_RS02030 (FOC72_02030) - 406436..407776 (+) 1341 WP_002894637.1 hemolysin family protein -
  FOC72_RS02035 (FOC72_02035) treR 408143..408856 (-) 714 WP_032914063.1 trehalose operon repressor Regulator
  FOC72_RS02040 (FOC72_02040) treP 409044..411041 (+) 1998 WP_002894639.1 PTS system trehalose-specific EIIBC component -
  FOC72_RS02045 (FOC72_02045) treC 411114..412745 (+) 1632 WP_002894641.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27817.73 Da        Isoelectric Point: 7.3121

>NTDB_id=453487 FOC72_RS02035 WP_032914063.1 408143..408856(-) (treR) [Streptococcus sanguinis strain FDAARGOS_770]
MKKYKQLFKQIEKDILEERYAVGDFLPSEHQLTEDYQVSRDTVRKALALLQEEGLIEKVRGQGSKVIKQEQFDFPVSKLT
SYQEVVKQNNMQSKTNVVSLEKITVDQKLSDITGFPPYRLVWRIVRQRVVDQVASVLDIDYLDKGIVPDLTREIAEQSIY
AYLENDLKLNIDYAKKEFTIDHANDRDKILMDLGKDQQVVSVKSQVYLADGRQFQYTESRHKLDKFRFVDFAKRQKE

Nucleotide


Download         Length: 714 bp        

>NTDB_id=453487 FOC72_RS02035 WP_032914063.1 408143..408856(-) (treR) [Streptococcus sanguinis strain FDAARGOS_770]
ATGAAGAAATACAAACAATTGTTCAAACAGATTGAGAAAGACATTTTAGAGGAACGTTATGCAGTCGGAGACTTCTTGCC
CAGCGAACATCAGCTGACAGAAGACTACCAGGTCAGCCGCGATACAGTCCGCAAGGCTCTGGCCCTGCTGCAGGAAGAAG
GATTGATTGAAAAAGTCCGTGGACAAGGTTCCAAAGTCATCAAGCAGGAACAGTTTGACTTTCCTGTGTCTAAGCTGACC
AGCTATCAAGAAGTAGTCAAACAGAATAATATGCAGTCCAAAACCAATGTTGTCAGCTTGGAAAAGATTACCGTGGACCA
GAAATTGTCCGACATCACTGGCTTCCCTCCTTACCGACTGGTTTGGCGAATCGTCCGTCAGCGCGTTGTGGACCAAGTCG
CCTCTGTATTAGATATTGACTATTTAGACAAGGGCATCGTCCCTGACTTGACAAGGGAAATCGCTGAGCAGTCCATTTAT
GCCTATTTGGAAAATGACTTAAAGCTCAATATCGATTATGCCAAGAAAGAATTTACCATTGACCACGCCAATGACCGAGA
CAAGATTCTCATGGACTTAGGCAAGGATCAGCAGGTCGTCTCTGTCAAATCCCAGGTCTATCTGGCAGACGGCCGCCAGT
TTCAATATACCGAGAGCCGTCACAAGCTAGACAAATTTCGCTTTGTGGATTTCGCTAAGCGTCAGAAAGAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(90-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A8B6N1G4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.916

100

0.599