Detailed information NTG0453429

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FOC85_RS12770
• Genome accession: NZ_CP054568
• Coordinates: 2421618..2422745 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470750.1
• Uniprot ID: A0A2C3GXQ0
• Organism: Bacillus thuringiensis strain FDAARGOS_791
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2416618..2427745

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC85_RS12740 (FOC85_12745)	spoIIIJ	2416664..2417431 (-)	768	WP_000727748.1	YidC family membrane integrase SpoIIIJ	-
FOC85_RS12745 (FOC85_12750)	rnpA	2417471..2417830 (-)	360	WP_000726628.1	ribonuclease P protein component	-
FOC85_RS12750 (FOC85_12755)	rpmH	2417907..2418041 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
FOC85_RS12755 (FOC85_12760)	dnaA	2418607..2419947 (+)	1341	WP_000428021.1	chromosomal replication initiator protein DnaA	-
FOC85_RS12760 (FOC85_12765)	dnaN	2420126..2421265 (+)	1140	WP_001212527.1	DNA polymerase III subunit beta	-
FOC85_RS12765 (FOC85_12770)	yaaA	2421393..2421605 (+)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
FOC85_RS12770 (FOC85_12775)	recF	2421618..2422745 (+)	1128	WP_000470750.1	DNA replication/repair protein RecF	Machinery gene
FOC85_RS12775 (FOC85_12780)	gyrB	2422784..2424706 (+)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
FOC85_RS12780 (FOC85_12785)	gyrA	2424795..2427266 (+)	2472	WP_001282851.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43334.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=453429 FOC85_RS12770 WP_000470750.1 2421618..2422745(+) (recF) [Bacillus thuringiensis strain FDAARGOS_791]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=453429 FOC85_RS12770 WP_000470750.1 2421618..2422745(+) (recF) [Bacillus thuringiensis strain FDAARGOS_791]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAAGTAAATGT
AATTATCGGCGAGAACGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTGGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGTGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGTTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAGAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTGAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATATTGCAAAAACGCTTTGAGTTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGATTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCAGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTATTCAGAAGTTAAGGAATATCCGATTCTTTTACTCGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: A0A2C3GXQ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651