Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   I6H78_RS03620 Genome accession   NZ_CP066059
Coordinates   751639..753975 (-) Length   778 a.a.
NCBI ID   WP_198460101.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_1021     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 746639..758975
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6H78_RS03600 (I6H78_03600) - 747204..748103 (-) 900 WP_198460097.1 TDT family transporter -
  I6H78_RS03605 (I6H78_03605) - 748211..749275 (-) 1065 WP_198460098.1 acyl-CoA dehydrogenase family protein -
  I6H78_RS03610 (I6H78_03610) - 749290..749838 (-) 549 WP_198460099.1 carboxymuconolactone decarboxylase family protein -
  I6H78_RS03615 (I6H78_03615) - 749970..751292 (-) 1323 WP_198460100.1 alanine/glycine:cation symporter family protein -
  I6H78_RS03620 (I6H78_03620) mutS/mutS2 751639..753975 (-) 2337 WP_198460101.1 endonuclease MutS2 Machinery gene
  I6H78_RS03625 (I6H78_03625) - 754076..754624 (-) 549 WP_049484262.1 CvpA family protein -
  I6H78_RS03630 (I6H78_03630) zapA 754621..754923 (-) 303 WP_000002028.1 cell division protein ZapA -
  I6H78_RS03635 (I6H78_03635) rnhC 755010..755891 (+) 882 WP_198460102.1 ribonuclease HIII -
  I6H78_RS03640 (I6H78_03640) lepB 755895..756509 (+) 615 WP_001083992.1 signal peptidase I -

Sequence

Protein


Download         Length: 778 a.a.        Molecular weight: 87546.51 Da        Isoelectric Point: 7.1500

>NTDB_id=453423 I6H78_RS03620 WP_198460101.1 751639..753975(-) (mutS/mutS2) [Streptococcus oralis strain FDAARGOS_1021]
MNTKILETLEFNKIKALFEPHLLTEQGLEELKGLAPTAKVDKIKQAFTEMEEMQALFVEQPHFTILATREISAVCKRLEM
GADLNIEEFLLLKRVLLASRELQGFYTNLENVRLEQLARWFEKLHDFPHLQGSLQALNDAGFIENFASEELARIRRKIHD
SESQVRDVLQDLLKQKAQMLTEGIIASRNGRQVLPVKNTYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADER
YEMIRILQELSERIRPHAAEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSENQVIQLLHVRHPLVKNAVANDVHFGKE
LTAIVITGPNTGGKTIMLKTLGLTQLMAQSGLPILADKGSRVGVFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVN
QHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIETAFVQNASMEFDTASLRPTYRFMQGVPG
RSNAFEIAKRLGLSDVIVGDASQQVNQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENLKMNRALKKLYNELNREKETE
LNKAREQAAEIVELALSESDQILKNLHSKSQLKPHEIIEAKAELKKLAPEKVDLSKNKVLQKAKKKRAPKVGDDIVVLSY
GQRGTLTNRLKDGRWEAQVGLIKMTLEEKEFDLVQAQQEAPVKKKQVNVVKRASGRGPQARLDLRGKRYEEAMNELDAFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKSFGYAPQNAGGSGATIVTFKG

Nucleotide


Download         Length: 2337 bp        

>NTDB_id=453423 I6H78_RS03620 WP_198460101.1 751639..753975(-) (mutS/mutS2) [Streptococcus oralis strain FDAARGOS_1021]
ATGAATACAAAAATACTAGAAACCTTAGAATTTAATAAAATCAAAGCCTTGTTTGAACCGCATCTCTTGACAGAACAAGG
ACTAGAGGAGCTAAAAGGCTTGGCTCCAACTGCCAAGGTGGACAAGATCAAGCAAGCCTTTACAGAGATGGAGGAAATGC
AAGCCCTTTTTGTGGAGCAACCCCACTTTACCATCCTAGCGACACGTGAGATTTCAGCTGTCTGTAAGCGTCTGGAGATG
GGAGCGGACCTCAATATTGAGGAGTTCCTGCTCCTCAAACGAGTCTTGCTGGCTAGCAGAGAGTTGCAAGGCTTTTATAC
CAATCTCGAAAACGTACGCTTGGAGCAGTTGGCGAGATGGTTTGAAAAACTACATGATTTCCCACACTTGCAAGGGAGTC
TCCAAGCCCTAAATGATGCAGGATTTATCGAAAATTTCGCCAGTGAAGAGCTAGCACGTATCCGTCGGAAAATCCATGAT
AGCGAGAGTCAAGTTCGAGATGTCTTGCAAGACTTACTCAAGCAAAAAGCGCAGATGTTGACGGAAGGCATAATCGCTAG
CCGAAATGGCCGTCAAGTCTTACCAGTCAAGAACACCTATCGCAATAAGATTGCAGGTGTTGTCCATGACATCTCTGCCA
GTGGAAACACGGTCTACATCGAGCCACGTGAGGTCGTGAAACTGAGCGAAGAAATCGCTAGTCTGCGAGCTGACGAACGA
TATGAGATGATTCGTATCCTGCAGGAGCTCTCAGAACGGATCCGCCCTCATGCTGCAGAGATTGCTAATGACGCTTGGAT
TATCGGCCATTTAGACTTGATTCGTGCCAAGGTGCGTTTCATCCAAGAAAGACAAGCAGTTGTTCCTCAACTTTCAGAGA
ATCAAGTGATTCAACTCCTTCATGTGCGCCATCCTTTGGTCAAAAATGCTGTTGCAAACGATGTACACTTTGGTAAGGAA
TTAACGGCCATTGTCATTACAGGTCCCAATACTGGTGGGAAGACCATCATGCTCAAAACCCTGGGCTTGACTCAACTTAT
GGCCCAATCTGGCTTGCCAATCTTAGCTGATAAGGGGAGCCGTGTCGGTGTTTTCGAGGAAATCTTCGCGGATATTGGGG
ATGAGCAGTCTATCGAGCAAAGCTTGTCTACCTTCTCCAGTCACATGACCAATATCGTAGATATTCTTGGCAAGGTCAAT
CAGCACTCGCTCTTATTGCTAGATGAGCTTGGGGCAGGGACCGATCCGCAGGAAGGAGCAGCGCTTGCTATGGCTATTTT
GGAGGATCTTCGTCTCCGTCAGGTCAAGACCATGGCGACGACCCACTATCCAGAGCTCAAGGCCTACGGTATCGAAACAG
CCTTTGTGCAAAATGCCAGCATGGAGTTTGATACAGCCAGCTTGCGTCCGACCTATCGCTTTATGCAGGGAGTTCCTGGT
CGAAGTAATGCCTTTGAAATTGCCAAACGTCTGGGCTTGTCAGATGTCATCGTAGGAGATGCCAGCCAGCAGGTCAATCA
AGATAATGATGTCAACCGCATCATTGAACAATTGGAAGAGCAAACGCTTGAAAGCCGTAAACGCTTGGACAATATCCGTG
AGGTGGAGCAAGAAAACCTCAAGATGAACCGGGCGCTCAAAAAACTCTACAACGAACTCAATCGTGAAAAGGAAACTGAG
CTCAACAAGGCGCGTGAACAAGCTGCCGAGATTGTGGAACTCGCTCTAAGTGAGAGTGACCAGATTCTCAAGAATCTTCA
CAGCAAGTCTCAACTCAAGCCCCACGAAATCATTGAAGCCAAGGCAGAACTGAAAAAACTAGCTCCTGAAAAAGTCGACT
TGTCTAAAAACAAGGTTCTTCAAAAGGCCAAGAAAAAACGAGCTCCAAAGGTGGGAGATGATATCGTGGTCCTCAGTTAT
GGCCAACGTGGAACTTTGACCAATCGGCTTAAGGACGGCCGCTGGGAAGCCCAAGTTGGCTTGATCAAGATGACCTTGGA
AGAGAAAGAATTTGACCTTGTTCAGGCCCAACAAGAAGCTCCAGTCAAGAAAAAACAAGTCAATGTCGTCAAACGTGCTT
CTGGTCGTGGTCCGCAAGCCAGACTGGATCTCCGAGGCAAACGGTACGAAGAGGCCATGAATGAGCTGGACGCCTTTATC
GACCAAGCCCTGCTTAATAACATGGCGCAGGTAGACATTATCCACGGTATCGGTACGGGAGTCATCCGGGAGGGCGTCAC
TAAATACCTGCAAAGAAATAAGCATGTCAAGAGTTTCGGCTATGCCCCACAAAATGCTGGAGGCAGTGGCGCCACCATTG
TAACCTTTAAAGGATAG

Domains

Predicted by InterProScan.

Smr domain (Smr)

(702-777)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

MutS domain V (MutS_V)

(324-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.811

100

0.414