Detailed information NTG0453395

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: HUF97_RS17030
• Genome accession: NZ_CP054562
• Coordinates: 3446325..3447488 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain YB-130
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3441325..3452488

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUF97_RS17000	-	3441589..3442008 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
HUF97_RS17005	comFC	3442082..3442771 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
HUF97_RS17010	-	3442777..3443061 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
HUF97_RS17015	comFA	3443119..3444504 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
HUF97_RS17020	-	3444613..3445461 (-)	849	WP_032876160.1	DegV family protein	-
HUF97_RS17025	degU	3445559..3446248 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
HUF97_RS17030	degS	3446325..3447488 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
HUF97_RS17035	-	3447711..3448358 (+)	648	WP_007614107.1	YigZ family protein	-
HUF97_RS17040	-	3448363..3449544 (+)	1182	WP_032876157.1	LCP family protein	-
HUF97_RS17045	-	3449643..3450719 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
HUF97_RS17050	-	3450852..3452048 (-)	1197	WP_032876154.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=453395 HUF97_RS17030 WP_007407484.1 3446325..3447488(-) (degS) [Bacillus velezensis strain YB-130]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=453395 HUF97_RS17030 WP_007407484.1 3446325..3447488(-) (degS) [Bacillus velezensis strain YB-130]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951