Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BAXH7_RS09840 Genome accession   NC_017191
Coordinates   1996692..1997156 (+) Length   154 a.a.
NCBI ID   WP_013352067.1    Uniprot ID   A0AAP7TCI0
Organism   Bacillus amyloliquefaciens XH7     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1991692..2002156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAXH7_RS09815 (BAXH7_02062) - 1992199..1992747 (-) 549 WP_013352072.1 hypothetical protein -
  BAXH7_RS09820 (BAXH7_02063) fadH 1992861..1993625 (-) 765 WP_013352071.1 2,4-dienoyl-CoA reductase -
  BAXH7_RS09825 (BAXH7_02064) - 1993769..1994632 (+) 864 WP_013352070.1 metallophosphoesterase -
  BAXH7_RS09830 (BAXH7_02065) - 1994707..1995201 (+) 495 WP_088030678.1 L,D-transpeptidase family protein -
  BAXH7_RS09835 (BAXH7_02066) - 1995277..1996569 (+) 1293 WP_013352068.1 MFS transporter -
  BAXH7_RS09840 (BAXH7_02067) kre 1996692..1997156 (+) 465 WP_013352067.1 YkyB family protein Regulator
  BAXH7_RS09845 (BAXH7_02068) cheV 1997193..1998104 (-) 912 WP_013352066.1 chemotaxis protein CheV -
  BAXH7_RS21015 (BAXH7_02070) - 1998293..1998454 (+) 162 WP_013352065.1 hypothetical protein -
  BAXH7_RS09850 (BAXH7_02071) - 1998656..1999869 (+) 1214 Protein_1955 aminotransferase A -
  BAXH7_RS09855 (BAXH7_02072) - 1999850..2001670 (-) 1821 WP_014470460.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17798.57 Da        Isoelectric Point: 10.4864

>NTDB_id=45317 BAXH7_RS09840 WP_013352067.1 1996692..1997156(+) (kre) [Bacillus amyloliquefaciens XH7]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNLLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=45317 BAXH7_RS09840 WP_013352067.1 1996692..1997156(+) (kre) [Bacillus amyloliquefaciens XH7]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACTTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCCCTTGCCG
CCAACAGACAGCAGCCCGCTTATCATAAACCCGTGTTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

93.506

100

0.935

Multiple sequence alignment