Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BAXH7_RS09735 Genome accession   NC_017191
Coordinates   1980515..1981111 (-) Length   198 a.a.
NCBI ID   WP_013352088.1    Uniprot ID   A0A9P1JH25
Organism   Bacillus amyloliquefaciens XH7     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1975515..1986111
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAXH7_RS09710 (BAXH7_02040) mobB 1975889..1976410 (-) 522 WP_014471749.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  BAXH7_RS09715 (BAXH7_02041) glp 1976371..1977663 (-) 1293 WP_013352092.1 gephyrin-like molybdotransferase Glp -
  BAXH7_RS09720 (BAXH7_02042) - 1977681..1978700 (-) 1020 WP_013352091.1 molybdopterin-synthase adenylyltransferase MoeB -
  BAXH7_RS09725 (BAXH7_02043) - 1978753..1979355 (-) 603 WP_013352090.1 molybdenum cofactor guanylyltransferase -
  BAXH7_RS09730 (BAXH7_02044) - 1979502..1980494 (+) 993 WP_013352089.1 hypothetical protein -
  BAXH7_RS09735 (BAXH7_02045) rok 1980515..1981111 (-) 597 WP_013352088.1 transcriptional regulator Rok Regulator
  BAXH7_RS09740 (BAXH7_02047) - 1981576..1982034 (-) 459 WP_014470457.1 redoxin domain-containing protein -
  BAXH7_RS09745 (BAXH7_02048) - 1982049..1982252 (-) 204 Protein_1933 peroxiredoxin -
  BAXH7_RS09750 (BAXH7_02049) - 1982486..1983292 (+) 807 WP_013352085.1 mechanosensitive ion channel family protein -
  BAXH7_RS09755 (BAXH7_02050) - 1983326..1983571 (-) 246 WP_013352084.1 YkuS family protein -
  BAXH7_RS09760 (BAXH7_02051) - 1983632..1984756 (-) 1125 WP_013352083.1 N-acetyldiaminopimelate deacetylase -
  BAXH7_RS09765 (BAXH7_02052) dapD 1984827..1985537 (-) 711 WP_013352082.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BAXH7_RS09770 (BAXH7_02053) - 1985619..1986074 (-) 456 WP_013352081.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22539.60 Da        Isoelectric Point: 9.6909

>NTDB_id=45316 BAXH7_RS09735 WP_013352088.1 1980515..1981111(-) (rok) [Bacillus amyloliquefaciens XH7]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSTQPQMQSITTLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETGNDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=45316 BAXH7_RS09735 WP_013352088.1 1980515..1981111(-) (rok) [Bacillus amyloliquefaciens XH7]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCAGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTACCAAAAGCCGCAG
ACACAGCCTCAATCCACCCAGCCGCAAATGCAGTCTATTACGACTCTTCCAGCCGGCATTCCAGACGGTTCTACTAGAAG
AAGAAGAGGGACGGCAAGACCGGGTTCAAAGGCGGCAAAACTGCGCGAAGCAGCCATTAAAACATTGAAACGCCACAATG
CAGCAATCAAAAGTTCAGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACCTTTATG
CAAAGCTTAATTAAAATGTATCCTGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGGAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

85.052

97.98

0.833

Multiple sequence alignment