Detailed information NTG0452665

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HUB32_RS14845
• Genome accession: NZ_CP054468
• Coordinates: 3306975..3308156 (-)
• Length: 393 a.a.
• NCBI ID: WP_098181562.1
• Uniprot ID: -
• Organism: Burkholderia gladioli strain CGB10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3301975..3313156

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUB32_RS14825	-	3302361..3302747 (+)	387	WP_013699429.1	nuclear transport factor 2 family protein	-
HUB32_RS14830	leuA	3302912..3304564 (-)	1653	WP_025097017.1	2-isopropylmalate synthase	-
HUB32_RS14835	ybiB	3305064..3306044 (-)	981	WP_103690647.1	DNA-binding protein YbiB	-
HUB32_RS14840	maiA	3306258..3306902 (+)	645	WP_017918780.1	maleylacetoacetate isomerase	-
HUB32_RS14845	pilA	3306975..3308156 (-)	1182	WP_098181562.1	signal recognition particle-docking protein FtsY	Machinery gene
HUB32_RS14850	rsmD	3308347..3308961 (+)	615	WP_036036218.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HUB32_RS14855	coaD	3309073..3309573 (+)	501	WP_013699423.1	pantetheine-phosphate adenylyltransferase	-
HUB32_RS14860	-	3309640..3309912 (+)	273	WP_013699422.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HUB32_RS14865	hisC	3310059..3311126 (-)	1068	WP_017918296.1	histidinol-phosphate transaminase	-
HUB32_RS14870	pth	3311222..3311827 (-)	606	WP_025097010.1	aminoacyl-tRNA hydrolase	-
HUB32_RS14875	-	3311924..3312538 (-)	615	WP_013699419.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 393 a.a.
• Molecular weight: 41410.47 Da
• Isoelectric Point: 4.8819

>NTDB_id=452665 HUB32_RS14845 WP_098181562.1 3306975..3308156(-) (pilA) [Burkholderia gladioli strain CGB10]
MFSFFKRLIGSKADGAPTDDQDAPTDRQDDAEAPAAEAPRPVERVAAPTPAPAVPVEPAAPAQVAPALPAAAHEDEAQAV
TAVEIVPPPAPEPAAKKSWIARLRSGLSKTSSSLTSVFVSTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVKAER
LTDPQQVKAALRGLLIALLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQL
AIWGERNNVTVVQQESGDPAAVIFDAVGAARARKINVVMADTAGRLPTQLHLMEELRKVKRVIGKAQADAPHEVLLVIDA
NTGQNALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFNAEEFTDALLG

Nucleotide

• Length: 1182 bp

>NTDB_id=452665 HUB32_RS14845 WP_098181562.1 3306975..3308156(-) (pilA) [Burkholderia gladioli strain CGB10]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGGCGCGCCGACCGACGACCAGGACGCGCCGACGGACCG
GCAGGACGACGCCGAGGCGCCCGCGGCCGAAGCGCCCCGGCCCGTCGAGCGGGTCGCCGCGCCGACGCCGGCGCCGGCGG
TTCCGGTCGAGCCGGCCGCGCCCGCGCAAGTCGCCCCTGCTCTCCCCGCCGCCGCGCACGAAGACGAAGCGCAGGCCGTC
ACGGCCGTCGAGATCGTGCCGCCGCCCGCGCCGGAGCCGGCCGCCAAGAAATCCTGGATCGCGCGCCTGCGCTCGGGCCT
GTCGAAGACCAGTTCGAGCCTGACCAGCGTGTTCGTCAGCACCAAGATCGACGAGGATCTCTACGAGGAGCTCGAGACCG
CGCTGCTGATGTCCGACGCCGGCGTCGACGCCACCGAGTACCTGCTCGGCGCGCTGCGCGAGAAGGTCAAGGCCGAGCGG
CTGACCGATCCGCAGCAGGTCAAGGCGGCCCTGCGCGGCCTGCTGATCGCGCTGCTCGCGCCGCTCGAGAAGTCGCTGAT
GCTGGGCCGCGCGCAGCCGCTGGTGATGATGATCGCGGGCGTCAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGG
CCAAGCACCTGCAGAGCTTCGACCAGTCGGTGCTGCTGGCCGCCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTC
GCGATCTGGGGCGAGCGCAACAACGTGACGGTGGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGT
GGGCGCCGCGCGCGCGCGCAAGATCAACGTGGTGATGGCCGATACGGCGGGCCGCCTGCCCACCCAGCTGCACCTGATGG
AGGAGCTGCGCAAGGTCAAGCGCGTGATCGGCAAGGCACAGGCCGACGCGCCGCACGAGGTGCTGCTGGTGATCGACGCC
AACACCGGCCAGAACGCGCTCGCCCAGGTAAAGGCCTTCGACGACGCGCTGGGCCTCACCGGCCTGATCGTCACCAAGCT
CGACGGCACCGCGAAGGGCGGCATCCTCGCCGCGATCGCGCGGCAGCGGCCGGTACCGGTCTACTTCATCGGCGTCGGCG
AGAAGGTGGAGGACCTGCAGCCCTTCAATGCCGAGGAGTTCACCGACGCGCTGCTGGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (194-392)

• SRP54-type protein, helical bundle domain (SRP54_N) (112-172)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.306	100	0.55