Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | HSZ49_RS06680 | Genome accession | NZ_CP054438 |
| Coordinates | 1359500..1360474 (+) | Length | 324 a.a. |
| NCBI ID | WP_011303021.1 | Uniprot ID | A0A380HM33 |
| Organism | Staphylococcus saprophyticus strain UTI-042y | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1354500..1365474
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HSZ49_RS06645 (HSZ49_06645) | rpmG | 1354920..1355069 (+) | 150 | WP_002483181.1 | 50S ribosomal protein L33 | - |
| HSZ49_RS06650 (HSZ49_06650) | - | 1355278..1355823 (+) | 546 | WP_041080616.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| HSZ49_RS06655 (HSZ49_06655) | - | 1355835..1357292 (+) | 1458 | WP_174543884.1 | rhomboid family intramembrane serine protease | - |
| HSZ49_RS06660 (HSZ49_06660) | - | 1357276..1357473 (+) | 198 | WP_041080619.1 | YqgQ family protein | - |
| HSZ49_RS06665 (HSZ49_06665) | - | 1357477..1358463 (+) | 987 | WP_002483184.1 | glucokinase | - |
| HSZ49_RS06670 (HSZ49_06670) | - | 1358463..1358789 (+) | 327 | WP_002483185.1 | MTH1187 family thiamine-binding protein | - |
| HSZ49_RS06675 (HSZ49_06675) | - | 1358789..1359412 (+) | 624 | WP_069822013.1 | MBL fold metallo-hydrolase | - |
| HSZ49_RS06680 (HSZ49_06680) | comGA | 1359500..1360474 (+) | 975 | WP_011303021.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HSZ49_RS06685 (HSZ49_06685) | comGB | 1360446..1361510 (+) | 1065 | WP_069822012.1 | competence type IV pilus assembly protein ComGB | - |
| HSZ49_RS06690 (HSZ49_06690) | comGC | 1361538..1361849 (+) | 312 | WP_037538386.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HSZ49_RS06695 (HSZ49_06695) | comGD | 1361830..1362285 (+) | 456 | WP_232334845.1 | competence type IV pilus minor pilin ComGD | - |
| HSZ49_RS06700 (HSZ49_06700) | comGF | 1362543..1362986 (+) | 444 | WP_002483191.1 | competence type IV pilus minor pilin ComGF | - |
| HSZ49_RS06705 (HSZ49_06705) | - | 1363190..1363663 (+) | 474 | WP_002483192.1 | shikimate kinase | - |
| HSZ49_RS06710 (HSZ49_06710) | gcvT | 1363847..1364938 (+) | 1092 | WP_041080630.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36606.84 Da Isoelectric Point: 9.7041
>NTDB_id=452499 HSZ49_RS06680 WP_011303021.1 1359500..1360474(+) (comGA) [Staphylococcus saprophyticus strain UTI-042y]
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINEKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKGAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYI
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINEKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKGAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYI
Nucleotide
Download Length: 975 bp
>NTDB_id=452499 HSZ49_RS06680 WP_011303021.1 1359500..1360474(+) (comGA) [Staphylococcus saprophyticus strain UTI-042y]
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATGAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAGGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACCGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTTAA
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATGAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAGGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACCGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
62.037 |
100 |
0.62 |
| comGA | Staphylococcus aureus N315 |
62.037 |
100 |
0.62 |