Detailed information NTG0452478

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: I6H98_RS16885
• Genome accession: NZ_CP065966
• Coordinates: 3616536..3617561 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain FDAARGOS_1041
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3611536..3622561

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H98_RS16860 (I6H98_16860)	-	3611725..3612042 (-)	318	WP_003120685.1	tetratricopeptide repeat protein	-
I6H98_RS16865 (I6H98_16865)	trkA	3612191..3613564 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
I6H98_RS16870 (I6H98_16870)	rsmB	3613591..3614895 (-)	1305	WP_003122291.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
I6H98_RS16875 (I6H98_16875)	fmt	3614892..3615836 (-)	945	WP_010793609.1	methionyl-tRNA formyltransferase	-
I6H98_RS16880 (I6H98_16880)	def	3615891..3616397 (-)	507	WP_003107059.1	peptide deformylase	-
I6H98_RS16885 (I6H98_16885)	tsaP	3616536..3617561 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
I6H98_RS16890 (I6H98_16890)	dprA	3617696..3618784 (+)	1089	WP_003118479.1	DNA-processing protein DprA	Machinery gene
I6H98_RS16895 (I6H98_16895)	-	3618825..3619382 (+)	558	WP_016561457.1	L-threonylcarbamoyladenylate synthase	-
I6H98_RS16900 (I6H98_16900)	-	3619392..3620369 (-)	978	WP_003097303.1	NADPH:quinone reductase	-
I6H98_RS16905 (I6H98_16905)	hemF	3620560..3621477 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
I6H98_RS16910 (I6H98_16910)	aroE	3621535..3622359 (+)	825	WP_003111201.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=452478 I6H98_RS16885 WP_003097294.1 3616536..3617561(+) (tsaP) [Pseudomonas aeruginosa strain FDAARGOS_1041]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=452478 I6H98_RS16885 WP_003097294.1 3616536..3617561(+) (tsaP) [Pseudomonas aeruginosa strain FDAARGOS_1041]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCACATCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCT
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393