Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   FCG87_RS07635 Genome accession   NZ_CP054411
Coordinates   1647488..1648114 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei strain KCJ3K19     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1642488..1653114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FCG87_RS07615 (FCG87_007615) - 1642887..1644647 (-) 1761 WP_032608967.1 Lon protease family protein -
  FCG87_RS07620 (FCG87_007620) matP 1644834..1645286 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  FCG87_RS07625 (FCG87_007625) ompA 1645352..1646404 (-) 1053 WP_120783682.1 porin OmpA -
  FCG87_RS07630 (FCG87_007630) sulA 1646761..1647270 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  FCG87_RS07635 (FCG87_007635) sxy/tfoX 1647488..1648114 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  FCG87_RS07640 (FCG87_007640) yccS 1648071..1650233 (-) 2163 WP_137048037.1 YccS family putative transporter -
  FCG87_RS07645 (FCG87_007645) - 1650252..1650698 (-) 447 WP_003858149.1 YccF domain-containing protein -
  FCG87_RS07650 (FCG87_007650) helD 1650821..1652875 (+) 2055 WP_137048039.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=452259 FCG87_RS07635 WP_023315767.1 1647488..1648114(+) (sxy/tfoX) [Enterobacter hormaechei strain KCJ3K19]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=452259 FCG87_RS07635 WP_023315767.1 1647488..1648114(+) (sxy/tfoX) [Enterobacter hormaechei strain KCJ3K19]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572