Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   JAV55_RS21135 Genome accession   NZ_CP065943
Coordinates   4138778..4139572 (-) Length   264 a.a.
NCBI ID   WP_003177960.1    Uniprot ID   A0ABY3FW26
Organism   Bacillus licheniformis strain H2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4133778..4144572
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JAV55_RS21105 (JAV55_21105) - 4133797..4133955 (-) 159 WP_003177948.1 CxxH/CxxC protein -
  JAV55_RS21110 (JAV55_21110) - 4134154..4134636 (-) 483 WP_035333986.1 DUF4234 domain-containing protein -
  JAV55_RS21115 (JAV55_21115) - 4135067..4135585 (-) 519 WP_011201784.1 N-acetyltransferase -
  JAV55_RS21120 (JAV55_21120) - 4135616..4136086 (-) 471 WP_003177954.1 membrane protein -
  JAV55_RS21125 (JAV55_21125) - 4136342..4137187 (-) 846 WP_061578315.1 S-adenosyl-l-methionine hydroxide adenosyltransferase family protein -
  JAV55_RS21130 (JAV55_21130) htrA 4137484..4138695 (-) 1212 WP_003177958.1 S1C family serine protease Regulator
  JAV55_RS21135 (JAV55_21135) vicX 4138778..4139572 (-) 795 WP_003177960.1 MBL fold metallo-hydrolase Regulator
  JAV55_RS21140 (JAV55_21140) - 4139587..4140435 (-) 849 WP_003177962.1 two-component system regulatory protein YycI -
  JAV55_RS21145 (JAV55_21145) - 4140422..4141786 (-) 1365 WP_003177963.1 YycH family regulatory protein -
  JAV55_RS21150 (JAV55_21150) walK 4141776..4143620 (-) 1845 WP_003177965.1 cell wall metabolism sensor histidine kinase WalK -
  JAV55_RS21155 (JAV55_21155) walR 4143628..4144335 (-) 708 WP_003177967.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29219.18 Da        Isoelectric Point: 5.7678

>NTDB_id=452211 JAV55_RS21135 WP_003177960.1 4138778..4139572(-) (vicX) [Bacillus licheniformis strain H2]
MSLQFSVLASGSTGNALYLETDDHAFLVDAGLSGKAMEGLMAQIDRKLDQLDGIFVTHEHSDHIKGLGVLARKYELPVYA
NEKTWKAMEGHIGKMDNGQKFVFPMETVKSFGSLDVESFGVSHDAAEPMFYVFHYNGRKLALITDTGYVSDRMKGIIRSA
NAFVFESNHDVGMLQMGRYPWNIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFAAGETFDLYDTDPKKPTPLVAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=452211 JAV55_RS21135 WP_003177960.1 4138778..4139572(-) (vicX) [Bacillus licheniformis strain H2]
ATGAGCCTGCAATTTAGCGTACTTGCGAGCGGGAGTACCGGTAATGCTTTATATTTGGAAACCGATGACCACGCTTTTTT
AGTTGACGCAGGACTTAGCGGGAAGGCGATGGAAGGGCTGATGGCGCAAATTGATCGAAAGCTTGATCAGCTCGACGGCA
TCTTTGTTACACATGAGCACAGTGACCATATAAAAGGGCTTGGCGTGCTGGCAAGAAAATATGAGCTGCCCGTTTACGCC
AATGAAAAAACGTGGAAGGCGATGGAAGGGCATATCGGCAAAATGGATAACGGCCAAAAGTTCGTTTTTCCAATGGAAAC
CGTCAAGTCATTCGGCTCCCTTGATGTCGAATCGTTCGGGGTATCCCATGATGCCGCAGAGCCGATGTTTTACGTTTTTC
ATTACAATGGCCGAAAGCTCGCTTTGATTACGGATACGGGCTATGTCAGCGACAGAATGAAAGGCATCATCCGCTCGGCA
AACGCTTTTGTTTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGCCGCTATCCGTGGAACATCAAGCGCCGGAT
TCTAAGCGACGTCGGACACGTATCCAATGAGGACGCGGCACTCGCAATGACCGATGTAATCGGCGATGAGACATCGAGAA
TTTATTTGGCTCATTTAAGCCAGGACAACAACATGAAAGAGCTGGCGAGAATGTCTGTGCAGCAAACGCTGGCTGCCAAA
GGATTTGCGGCAGGAGAAACGTTTGACTTATATGATACCGATCCTAAGAAACCGACGCCTCTCGTAGCGGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.053

99.242

0.527