Detailed information NTG0045221

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: SDSE_RS16520
• Genome accession: NC_019042
• Coordinates: 1186317..1188524 (-)
• Length: 735 a.a.
• NCBI ID: WP_015057673.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis AC-2713
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1181317..1193524

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDSE_RS16490 (S_dysgal_equisimilis_AC2713_1246)	-	1181713..1182534 (-)	822	WP_012767133.1	ZIP family metal transporter	-
SDSE_RS16495 (S_dysgal_equisimilis_AC2713_1247)	-	1182552..1183340 (-)	789	WP_003054664.1	Nif3-like dinuclear metal center hexameric protein	-
SDSE_RS16500 (S_dysgal_equisimilis_AC2713_1248)	-	1183330..1184016 (-)	687	WP_003054660.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	-
SDSE_RS16505 (S_dysgal_equisimilis_AC2713_1249)	nth	1184097..1184753 (-)	657	WP_003054655.1	endonuclease III	-
SDSE_RS16510 (S_dysgal_equisimilis_AC2713_1250)	-	1184750..1185433 (-)	684	WP_003054653.1	DnaD domain-containing protein	-
SDSE_RS16515 (S_dysgal_equisimilis_AC2713_1251)	-	1185651..1186169 (-)	519	WP_003054649.1	adenine phosphoribosyltransferase	-
SDSE_RS16520 (S_dysgal_equisimilis_AC2713_1252)	recJ	1186317..1188524 (-)	2208	WP_015057673.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
SDSE_RS16525 (S_dysgal_equisimilis_AC2713_1253)	-	1188521..1189285 (-)	765	WP_003054659.1	SDR family oxidoreductase	-
SDSE_RS16530 (S_dysgal_equisimilis_AC2713_1254)	rnz	1189285..1190214 (-)	930	WP_003054662.1	ribonuclease Z	-
SDSE_RS16535 (S_dysgal_equisimilis_AC2713_1255)	-	1190229..1190864 (-)	636	WP_012767138.1	cystathionine beta-lyase	-
SDSE_RS16540 (S_dysgal_equisimilis_AC2713_1256)	hflX	1190857..1192095 (-)	1239	WP_015057674.1	GTPase HflX	-
SDSE_RS16545 (S_dysgal_equisimilis_AC2713_1257)	miaA	1192183..1193067 (-)	885	WP_015057675.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
SDSE_RS21455 (S_dysgal_equisimilis_AC2713_1258)	-	1193200..1193376 (+)	177	WP_012767140.1	DUF3042 family protein	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 82147.05 Da
• Isoelectric Point: 4.7219

>NTDB_id=45221 SDSE_RS16520 WP_015057673.1 1186317..1188524(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYERGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLMGFDDQEAQAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMEAIGQTVIVLAIDNGFAKGSARSLEAINIFEALSG
NRDLFTAFGGHAGAAGVTLPVDNLEALSDLLCQFVIERGLDQTAKNTLTIDERLSLEDLSLDTLKSLDKLAPYGMDHPKP
IFYVKDIKVSQARTMGQDQSHLKFKVSQGKTSFDVLAFGQGSQLQDFQQATGLELAVTLSVNHWNGNTSLQLMLVDARVE
GVQLLDLRSKTAKLPEGIPTIEEDPNATVIVIKELPESFKDWRHQFADRTFDAIYFKNQIKHPYYLTGFGSREQFAKLYK
TIYQFPEFDVRHKLTDLSRYLNIDKLLLIKLIQIFEELAFVTIEDGLMTVNPQAQKRDISESRIYQELKELVKFQEIMAL
ASPQEMYDYLVNSKP

Nucleotide

• Length: 2208 bp

>NTDB_id=45221 SDSE_RS16520 WP_015057673.1 1186317..1188524(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTACGAGCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTGTCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGATGGGCTTTGATGACCAAGAAGCTCAAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAGGCTTTGGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCAGTTCAAGTCTT
AGCTCAAGCTGGTTGGCATCCAGGTGTGCTAGGTATTGTAGCGGGTCGCATTATGGAAGCCATTGGACAGACGGTCATTG
TCTTAGCTATTGATAACGGTTTTGCGAAAGGCTCGGCCAGAAGTTTAGAGGCCATTAATATATTTGAAGCCTTAAGTGGG
AATCGTGATCTTTTTACAGCTTTCGGTGGACATGCTGGTGCAGCTGGGGTGACTTTGCCCGTGGATAATTTAGAAGCTTT
ATCGGACTTGCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCTAAAAATACGTTAACTATTGATGAAAGGC
TGTCTTTGGAGGATCTTAGTCTTGATACTTTAAAGAGTTTGGACAAACTAGCCCCCTATGGGATGGATCATCCTAAGCCA
ATCTTTTATGTTAAGGATATTAAAGTTAGTCAAGCGCGTACCATGGGTCAAGACCAGAGTCATCTTAAATTCAAAGTCAG
CCAGGGTAAGACCTCCTTTGATGTTCTGGCTTTTGGTCAAGGAAGCCAACTACAAGACTTTCAACAAGCTACTGGTTTAG
AGTTAGCGGTAACTTTATCCGTCAACCACTGGAACGGCAATACCAGCCTCCAACTAATGTTGGTTGACGCTCGTGTTGAA
GGGGTGCAGTTGCTTGATTTACGGTCAAAAACAGCTAAACTACCCGAAGGTATTCCGACGATTGAGGAAGATCCCAATGC
AACAGTTATTGTTATTAAAGAGCTTCCAGAGTCTTTTAAAGACTGGCGTCATCAGTTCGCTGATAGAACCTTCGATGCCA
TTTATTTTAAAAATCAGATTAAACACCCCTATTACCTAACAGGTTTTGGAAGTCGTGAACAGTTTGCTAAACTCTATAAA
ACCATTTACCAATTTCCAGAATTTGATGTGCGTCATAAATTGACTGACTTGAGTCGCTACTTAAACATTGACAAACTTTT
ACTGATTAAGCTCATTCAGATTTTTGAAGAGCTAGCTTTTGTGACGATTGAAGATGGCCTGATGACAGTTAACCCACAAG
CGCAAAAGCGAGATATTTCTGAGAGTCGTATCTACCAAGAGCTAAAAGAACTCGTGAAGTTCCAAGAAATCATGGCCTTG
GCCAGTCCTCAAGAAATGTATGATTATTTGGTCAATTCGAAACCATAA

Domains

Predicted by InterProScan.

• DHH family (DHH) (83-228)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• RecJ OB domain (RecJ_OB) (450-556)

• DHHA1 domain (DHHA1) (317-435)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.784	100	0.642
recJ	Bacillus subtilis subsp. subtilis str. 168	36.108	100	0.384