Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   JAN99_RS07785 Genome accession   NZ_CP065927
Coordinates   1588164..1588643 (-) Length   159 a.a.
NCBI ID   WP_229021993.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm9ST603     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1583164..1593643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JAN99_RS07765 (JAN99_07760) - 1583333..1583938 (-) 606 WP_002982799.1 response regulator transcription factor -
  JAN99_RS07770 (JAN99_07765) - 1583919..1585481 (-) 1563 WP_111693397.1 hypothetical protein -
  JAN99_RS07775 (JAN99_07770) - 1585515..1587428 (-) 1914 WP_136116166.1 FtsX-like permease family protein -
  JAN99_RS07780 (JAN99_07775) - 1587430..1588167 (-) 738 WP_136022674.1 ABC transporter ATP-binding protein -
  JAN99_RS07785 (JAN99_07780) comA/nlmT 1588164..1588643 (-) 480 WP_229021993.1 ATP-binding cassette domain-containing protein Regulator
  JAN99_RS07790 (JAN99_07785) - 1588699..1590324 (-) 1626 WP_136116168.1 DUF4135 domain-containing protein -
  JAN99_RS07795 (JAN99_07790) - 1590406..1590561 (-) 156 WP_002982773.1 type A2 lanthipeptide -
  JAN99_RS07800 (JAN99_07795) lacG 1591064..1592470 (-) 1407 WP_038434265.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18505.10 Da        Isoelectric Point: 6.3350

>NTDB_id=452058 JAN99_RS07785 WP_229021993.1 1588164..1588643(-) (comA/nlmT) [Streptococcus pyogenes strain emm9ST603]
MFDGDVMYNISLGRESVSGEQVIETCKRVSLYEDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRVLVTHRLNTVEKADKILIMDNGKIIDYGSHHCLYKNNEYYRDLYDSYMNNYQEEEIK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=452058 JAN99_RS07785 WP_229021993.1 1588164..1588643(-) (comA/nlmT) [Streptococcus pyogenes strain emm9ST603]
ATATTTGATGGGGATGTGATGTATAACATTTCGCTAGGGAGAGAATCTGTTTCAGGAGAACAGGTTATTGAAACTTGTAA
AAGGGTATCACTATATGAGGATATCAGGAGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGACAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTTTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGGAAAATTATTGACTATGGTAGTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGAGATAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(34-81)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

39.597

93.711

0.371
  rcrQ Streptococcus mutans UA159

39.333

94.34

0.371