Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HG554_RS26120 Genome accession   NZ_CP054264
Coordinates   5689997..5690398 (-) Length   133 a.a.
NCBI ID   WP_010955560.1    Uniprot ID   -
Organism   Pseudomonas putida strain A0_F0_I1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5684997..5695398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HG554_RS26105 (HG554_26095) - 5686961..5688985 (-) 2025 WP_232014163.1 methyl-accepting chemotaxis protein -
  HG554_RS26110 (HG554_26100) - 5689033..5689587 (-) 555 WP_010955559.1 chemotaxis protein CheW -
  HG554_RS26115 (HG554_26105) pilH 5689584..5689949 (-) 366 WP_003249327.1 twitching motility response regulator PilH -
  HG554_RS26120 (HG554_26110) pilG 5689997..5690398 (-) 402 WP_010955560.1 PleD family two-component system response regulator Regulator
  HG554_RS26125 (HG554_26115) gshB 5690637..5691590 (+) 954 WP_010955561.1 glutathione synthase -
  HG554_RS26130 (HG554_26120) - 5691682..5692587 (+) 906 WP_010955562.1 energy transducer TonB -
  HG554_RS26135 (HG554_26125) - 5692757..5693326 (+) 570 WP_003249318.1 YqgE/AlgH family protein -
  HG554_RS26140 (HG554_26130) ruvX 5693326..5693751 (+) 426 WP_010955563.1 Holliday junction resolvase RuvX -
  HG554_RS26145 (HG554_26135) pyrR 5693801..5694319 (+) 519 WP_003249313.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HG554_RS26150 (HG554_26140) - 5694332..5695336 (+) 1005 WP_003249311.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14602.85 Da        Isoelectric Point: 6.4772

>NTDB_id=451709 HG554_RS26120 WP_010955560.1 5689997..5690398(-) (pilG) [Pseudomonas putida strain A0_F0_I1]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAPQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=451709 HG554_RS26120 WP_010955560.1 5689997..5690398(-) (pilG) [Pseudomonas putida strain A0_F0_I1]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCATCAGCCCAGTATCATTTTCG
TCGATGTGCTGATGCCACGCCTGGACGGCTACCAGACCTGCGCGGTAATCAAGCACAACAGTGCCTTCAAGGACACCCCG
GTTATCCTGCTGTCGTCCCGCGATGGCCTGTTCGACAAGGCCCGCGGGCGGGTGGTCGGTTCCGATCAGTTCCTGACCAA
GCCGTTCAGCAAGGAAGAACTGCTCGACGCGATCCGCGCCCATGTGCCCGGGTTTGCCGCACCTCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632