Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STRR_RS04105 Genome accession   NZ_CP065788
Coordinates   783095..783577 (+) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus strain RR     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 778095..788577
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STRR_RS04085 (STRR_04060) queG 778968..780086 (+) 1119 WP_011226076.1 tRNA epoxyqueuosine(34) reductase QueG -
  STRR_RS04090 (STRR_04065) prfB 780139..781237 (+) 1099 WP_116920253.1 peptide chain release factor 2 -
  STRR_RS04095 (STRR_04070) ftsE 781325..782017 (+) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  STRR_RS04100 (STRR_04075) ftsX 782010..782939 (+) 930 WP_011681194.1 permease-like cell division protein FtsX -
  STRR_RS04105 (STRR_04080) mutX 783095..783577 (+) 483 WP_011226072.1 8-oxo-dGTP diphosphatase Machinery gene
  STRR_RS04110 (STRR_04085) - 783588..784766 (+) 1179 WP_071417361.1 AI-2E family transporter -
  STRR_RS04115 (STRR_04090) - 784756..785985 (+) 1230 WP_002953086.1 lipopolysaccharide assembly protein LapB -
  STRR_RS04120 (STRR_04095) lepB 786108..786665 (+) 558 WP_071417362.1 signal peptidase I -
  STRR_RS04125 (STRR_04100) pepT 786873..788096 (+) 1224 WP_071417363.1 peptidase T -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=451272 STRR_RS04105 WP_011226072.1 783095..783577(+) (mutX) [Streptococcus thermophilus strain RR]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=451272 STRR_RS04105 WP_011226072.1 783095..783577(+) (mutX) [Streptococcus thermophilus strain RR]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706