Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   HRE60_RS09070 Genome accession   NZ_CP054153
Coordinates   2004244..2004954 (+) Length   236 a.a.
NCBI ID   WP_181670766.1    Uniprot ID   A0A7L6WLZ3
Organism   Streptococcus salivarius strain DB-B5     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1999244..2009954
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRE60_RS09060 (HRE60_09060) treC 2000458..2002083 (-) 1626 WP_181670764.1 alpha,alpha-phosphotrehalase -
  HRE60_RS09065 (HRE60_09065) treP 2002138..2004087 (-) 1950 WP_181670765.1 PTS system trehalose-specific EIIBC component -
  HRE60_RS09070 (HRE60_09070) treR 2004244..2004954 (+) 711 WP_181670766.1 trehalose operon repressor Regulator
  HRE60_RS09075 (HRE60_09075) - 2005008..2005568 (-) 561 WP_021144703.1 TIGR01440 family protein -
  HRE60_RS09080 (HRE60_09080) - 2005584..2005922 (-) 339 WP_014635137.1 hypothetical protein -
  HRE60_RS09085 (HRE60_09085) - 2005955..2006311 (-) 357 WP_002885732.1 hypothetical protein -
  HRE60_RS10860 - 2007018..2007155 (+) 138 Protein_1741 helix-turn-helix domain-containing protein -
  HRE60_RS09090 (HRE60_09090) - 2007201..2007368 (+) 168 WP_181670767.1 hypothetical protein -
  HRE60_RS09095 (HRE60_09095) - 2007587..2009281 (-) 1695 WP_181670768.1 hypothetical protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27370.06 Da        Isoelectric Point: 7.1167

>NTDB_id=451199 HRE60_RS09070 WP_181670766.1 2004244..2004954(+) (treR) [Streptococcus salivarius strain DB-B5]
MKKYQIIYKDLEKAIHEQKYQVGDFLPTEQELVQSYQVSRDTIRKALTLLVEEGLVKKIHGSGSQVINQEQINFPVSDLT
SYQELIEQQGLNSQTNVISLDKIIVDSKLSERTGFSNSRQVWRVVRQRVVDSCASVIDIDYLDASLVPQLNRSIAEYSIY
DYIENQLKLSISHAFKEITIDNATDQDKILIDLGKDQHVVCVRSKVYLNNGKQFQFTESRHKLEKFKFVDYAKRHH

Nucleotide


Download         Length: 711 bp        

>NTDB_id=451199 HRE60_RS09070 WP_181670766.1 2004244..2004954(+) (treR) [Streptococcus salivarius strain DB-B5]
ATGAAAAAATATCAGATTATTTATAAGGATTTAGAAAAAGCTATCCATGAGCAAAAGTATCAAGTGGGAGACTTTCTCCC
CACCGAGCAAGAACTGGTTCAATCTTACCAGGTTAGTAGAGATACTATACGAAAGGCATTAACCTTACTCGTTGAAGAAG
GCTTGGTCAAAAAAATTCATGGCTCTGGCTCTCAGGTTATTAACCAGGAACAAATCAACTTTCCTGTGTCTGACCTTACT
AGTTACCAAGAACTAATAGAACAACAAGGCCTTAATTCGCAAACCAACGTTATTTCTCTGGATAAAATCATCGTTGATTC
CAAACTCTCAGAAAGAACTGGTTTTTCTAATAGCCGACAGGTCTGGCGTGTTGTTCGTCAAAGAGTCGTTGATAGCTGTG
CCTCTGTTATAGATATTGATTACCTAGATGCAAGCCTTGTTCCTCAACTAAACCGTAGCATTGCTGAATACTCTATTTAC
GACTACATTGAGAATCAGCTCAAACTTAGCATTTCCCACGCCTTTAAAGAAATCACTATTGATAATGCTACCGATCAGGA
TAAGATTCTTATCGATCTAGGTAAGGACCAGCACGTTGTCTGTGTCCGTTCAAAAGTTTATTTAAACAATGGAAAACAGT
TCCAATTTACGGAAAGTCGCCACAAACTTGAAAAATTCAAATTCGTTGATTATGCCAAGCGCCACCATTGA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(4-66)

UTRA domain (UTRA)

(88-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L6WLZ3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

61.277

99.576

0.61