Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   I6G27_RS10650 Genome accession   NZ_CP065751
Coordinates   2392368..2395322 (+) Length   984 a.a.
NCBI ID   WP_062333844.1    Uniprot ID   A0A378QCV6
Organism   Moraxella osloensis strain FDAARGOS_870     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2387368..2400322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G27_RS10630 (I6G27_10630) ssb 2388099..2388758 (-) 660 WP_062333857.1 single-stranded DNA-binding protein Machinery gene
  I6G27_RS10635 (I6G27_10635) - 2389069..2390433 (-) 1365 WP_062333853.1 MFS transporter -
  I6G27_RS10640 (I6G27_10640) - 2390629..2391633 (-) 1005 WP_062333849.1 hypothetical protein -
  I6G27_RS10645 (I6G27_10645) - 2391837..2392253 (+) 417 WP_062333847.1 hypothetical protein -
  I6G27_RS10650 (I6G27_10650) uvrA 2392368..2395322 (+) 2955 WP_062333844.1 excinuclease ABC subunit UvrA Machinery gene
  I6G27_RS10655 (I6G27_10655) - 2395541..2396074 (+) 534 WP_062333841.1 chalcone isomerase family protein -
  I6G27_RS10660 (I6G27_10660) - 2396478..2397578 (+) 1101 WP_062333839.1 potassium channel family protein -
  I6G27_RS10665 (I6G27_10665) - 2397608..2398714 (-) 1107 WP_062333836.1 RNA-guided endonuclease TnpB family protein -

Sequence

Protein


Download         Length: 984 a.a.        Molecular weight: 108667.08 Da        Isoelectric Point: 6.7694

>NTDB_id=451124 I6G27_RS10650 WP_062333844.1 2392368..2395322(+) (uvrA) [Moraxella osloensis strain FDAARGOS_870]
MAQHDAIKIRGARTHNLKNIDIDIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSQMEKPEVDSIE
GLSPAIAIEQKSTNHNPRSTVGTITEIYDYLRLLYARVGTPMCPEHHLPMVAQTVTEMVDTVMALPEDTKLMILARVVDD
RKGEHIQLMEQLKGQGFVRLRVDGEIYDIDDVPPLAKTFKHTIDVVVDRFKVRDDLGNRVAESLETALRLGSDIAILHDM
DAKFEDKILSAKHSCPVCDRSVAELEPKLFSFNNPYGACPVCDGLGKRQYFAAEKIIGHPEKSLNQGAIQGWDKRHAYYF
GLLTTVAEHYGIDMEAPWQQLDKKHKDVILHGSGKDKMTFNFVDERGRKSTKTVPFEGVLPYMERRYRTTQSSIVRDELA
KYLADATCDACHGSRLNEIARHVEVSDRTVAEMVKLSIGEAMAYYEQLKLEGAKGEIAAKIIKEIRERLEFLVSVGLDYL
TLARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLTRLRDLGNTVIVVEHDEDAIRLADHII
DVGVGAGVHGGSIIAEGTAEDIAKNPESLTGQYLSGKKKIAVPTVRHRAKIANDDKYEKMQDSAIPLTKNQAKKAESEKK
EKAKKGKVEAKPLMLTLTGAKGNNLKNVTLNLPIGVFTAITGVSGSGKSTLINRTLLPLATTQLNNATTHVAEAFDSITG
LEHLDKVVDIDQSPIGRTPRSNPATYTGVFSPIRDLFAQVPESKARGYQAGRFSFNVKGGRCETCQGDGLIKVEMHFLPD
MYVPCDACQGKRYNRETLEITYKGKNINDVLNMTVEDAAEFFEAIPAIYRRLQALQEVGLGYIRLGQSAPTLSGGEAQRV
KLAKELSKRDTGQTLYVLDEPTTGLHFHDIAKLLDILHTLRDRGNTVVVIEHNLDVIKTADWIVDLGPEGGSGGGEIIAE
GTPEEVAQNARSHTGRFLKPMLQA

Nucleotide


Download         Length: 2955 bp        

>NTDB_id=451124 I6G27_RS10650 WP_062333844.1 2392368..2395322(+) (uvrA) [Moraxella osloensis strain FDAARGOS_870]
ATGGCACAGCACGACGCAATCAAAATTCGTGGCGCACGCACCCACAATCTCAAAAACATCGACATCGACATCCCTCGCGA
CAAACTCGTCGTCATCACAGGCTTATCAGGCTCGGGCAAGTCTAGCCTAGCCTTTGACACCCTATACGCCGAAGGACAAC
GCCGCTACGTCGAGAGCCTATCGGCTTACGCTCGCCAGTTTTTATCACAAATGGAAAAGCCCGAAGTCGATAGCATCGAA
GGGCTATCACCTGCCATCGCCATCGAGCAAAAATCCACCAACCATAATCCTCGCTCTACAGTGGGTACGATTACTGAGAT
TTATGACTATTTGCGTCTGCTGTACGCCCGTGTCGGTACGCCCATGTGCCCAGAACACCACCTGCCGATGGTCGCGCAAA
CTGTCACCGAAATGGTCGATACCGTCATGGCATTGCCCGAAGACACCAAGTTGATGATTCTCGCGCGCGTCGTTGATGAC
CGCAAAGGCGAGCATATTCAGCTCATGGAACAGCTAAAAGGGCAAGGCTTTGTGCGGCTGCGGGTCGATGGCGAAATTTA
TGATATTGACGATGTGCCACCACTTGCCAAAACCTTTAAACACACCATTGATGTGGTGGTTGACCGCTTCAAAGTGCGGG
ATGACTTGGGTAATCGGGTTGCCGAAAGTTTGGAGACCGCCTTACGACTCGGTAGCGATATTGCCATCTTGCATGACATG
GATGCCAAGTTTGAGGATAAAATTTTGTCCGCCAAACATAGCTGCCCTGTCTGCGATCGCTCGGTTGCTGAGCTTGAGCC
AAAATTGTTTAGTTTTAATAACCCCTATGGCGCGTGTCCCGTGTGTGATGGCTTGGGCAAACGCCAATATTTTGCTGCCG
AAAAAATCATCGGTCATCCTGAAAAATCGCTTAACCAAGGGGCGATTCAAGGCTGGGATAAACGCCACGCCTACTATTTT
GGCTTGCTGACCACCGTTGCCGAGCATTACGGCATTGATATGGAAGCGCCTTGGCAACAACTGGATAAAAAGCACAAAGA
TGTCATTTTACATGGCTCTGGTAAAGACAAAATGACTTTTAACTTTGTCGATGAACGCGGGCGCAAATCTACCAAAACCG
TGCCATTTGAAGGGGTGTTGCCGTATATGGAGCGCCGTTACCGCACCACGCAAAGCAGCATCGTGCGAGATGAGCTTGCC
AAATACCTTGCCGATGCCACCTGCGATGCCTGTCACGGCTCACGCCTAAACGAAATCGCTCGCCATGTCGAAGTCAGCGA
CCGTACCGTTGCCGAAATGGTCAAGCTATCGATTGGCGAAGCAATGGCGTATTACGAGCAATTAAAACTCGAGGGCGCAA
AAGGCGAAATCGCCGCCAAAATCATCAAAGAAATCCGTGAGCGGTTGGAATTTTTGGTGAGTGTGGGCTTGGATTATCTC
ACCCTTGCCCGCTCTGCCGAAACCCTATCGGGCGGTGAAGCGCAGCGCATACGCCTTGCTAGCCAAATCGGGGCGGGCTT
GATGGGCGTGATGTATGTACTCGATGAGCCATCAATCGGCTTGCACCAACGTGACAATGATCGCCTGCTGCAAACGTTGA
CTCGGCTCAGAGATTTGGGCAATACCGTGATTGTCGTCGAGCATGACGAAGATGCCATTCGCCTAGCCGACCATATCATC
GATGTGGGCGTGGGTGCTGGTGTGCATGGTGGCAGTATTATTGCAGAAGGGACGGCAGAAGACATTGCCAAAAATCCTGA
GTCATTGACGGGGCAATATTTATCAGGCAAAAAGAAAATCGCCGTGCCAACCGTGCGTCACCGAGCCAAAATCGCCAATG
ACGATAAATATGAAAAAATGCAAGACTCCGCCATTCCCTTAACCAAAAACCAAGCGAAAAAAGCGGAAAGCGAGAAAAAA
GAAAAAGCCAAAAAAGGTAAAGTCGAAGCCAAACCTTTGATGCTGACCTTGACAGGGGCAAAAGGTAATAACCTTAAAAA
CGTGACCTTAAACTTGCCGATTGGTGTGTTTACCGCCATCACAGGCGTGTCGGGTTCGGGTAAATCGACCTTAATCAATC
GCACCTTATTGCCACTAGCGACCACGCAGCTCAATAACGCCACCACGCATGTTGCCGAAGCGTTTGACAGTATCACTGGG
CTAGAACATTTAGATAAAGTCGTCGATATCGACCAAAGCCCGATTGGGCGTACCCCACGCTCCAATCCTGCGACTTACAC
GGGCGTATTTAGTCCGATTCGTGACCTATTCGCCCAAGTGCCTGAGTCCAAGGCTCGTGGCTATCAAGCAGGGCGATTTA
GCTTTAACGTGAAAGGCGGTCGCTGTGAAACCTGCCAAGGCGATGGCTTGATTAAGGTTGAGATGCACTTTTTGCCTGAT
ATGTATGTGCCTTGCGATGCGTGTCAAGGCAAACGCTACAACCGTGAAACCCTTGAAATCACCTATAAGGGCAAAAATAT
CAATGACGTGCTCAATATGACGGTGGAGGATGCGGCAGAATTTTTTGAGGCGATTCCGGCAATTTACCGCCGTTTGCAAG
CCCTACAAGAAGTCGGCTTGGGTTATATTCGTTTGGGTCAGTCTGCACCAACCTTATCGGGTGGTGAGGCGCAACGGGTG
AAACTTGCCAAAGAGCTGTCCAAACGTGATACCGGTCAGACCTTGTATGTGCTCGATGAGCCGACGACAGGTTTGCATTT
CCATGATATCGCCAAGCTCCTAGACATCTTGCATACGCTACGCGACCGCGGCAATACCGTGGTGGTGATTGAGCATAATC
TCGATGTGATTAAGACAGCCGACTGGATTGTCGATTTGGGTCCTGAAGGCGGTTCGGGTGGTGGTGAGATTATTGCCGAG
GGCACGCCAGAGGAGGTAGCGCAAAACGCGCGCTCGCATACAGGGCGATTCTTAAAACCGATGTTGCAAGCCTAA

Domains

Predicted by InterProScan.

UvrA interaction domain (UvrA_inter)

(133-239)

UvrA DNA-binding domain (UvrA_DNA-bind)

(294-401)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378QCV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

54.878

100

0.549
  uvrA Streptococcus pneumoniae TIGR4

54.878

100

0.549
  uvrA Streptococcus pneumoniae D39

54.878

100

0.549