Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE1/comEA   Type   Machinery gene
Locus tag   I6G27_RS01260 Genome accession   NZ_CP065751
Coordinates   282473..282856 (+) Length   127 a.a.
NCBI ID   WP_062333212.1    Uniprot ID   A0A378QBU2
Organism   Moraxella osloensis strain FDAARGOS_870     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 277473..287856
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G27_RS01240 (I6G27_01240) - 277859..279313 (-) 1455 WP_062333221.1 phosphomannomutase/phosphoglucomutase -
  I6G27_RS01245 (I6G27_01245) - 279411..280634 (-) 1224 WP_062333218.1 nucleotide sugar dehydrogenase -
  I6G27_RS01250 (I6G27_01250) mazG 280977..281807 (+) 831 WP_062333215.1 nucleoside triphosphate pyrophosphohydrolase -
  I6G27_RS01255 (I6G27_01255) - 281794..282480 (+) 687 WP_050325281.1 hypothetical protein -
  I6G27_RS01260 (I6G27_01260) comE1/comEA 282473..282856 (+) 384 WP_062333212.1 ComEA family DNA-binding protein Machinery gene
  I6G27_RS01265 (I6G27_01265) pcnB 283100..285358 (+) 2259 WP_062333209.1 polynucleotide adenylyltransferase PcnB -
  I6G27_RS01270 (I6G27_01270) folK 285355..285849 (+) 495 WP_062333206.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  I6G27_RS01275 (I6G27_01275) panB 286050..286931 (+) 882 WP_172460501.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 13629.82 Da        Isoelectric Point: 10.1454

>NTDB_id=451072 I6G27_RS01260 WP_062333212.1 282473..282856(+) (comE1/comEA) [Moraxella osloensis strain FDAARGOS_870]
MISRWLKNVLLTNAFVVYCGIAYAQPICTPTMTPEQAFLAVTNLTGTNGGTTKPSANVLANSPKVININTASEAQLTQLD
GIGAKKAQQIILYRQMIAPFATADDLANVKGIGKATVDKNRHRIITQ

Nucleotide


Download         Length: 384 bp        

>NTDB_id=451072 I6G27_RS01260 WP_062333212.1 282473..282856(+) (comE1/comEA) [Moraxella osloensis strain FDAARGOS_870]
ATGATTAGCCGATGGTTAAAAAACGTTTTGCTTACCAATGCTTTTGTAGTTTACTGTGGCATTGCTTATGCCCAACCAAT
TTGTACCCCAACCATGACGCCCGAGCAGGCTTTTTTGGCAGTGACAAATTTGACTGGGACTAACGGTGGCACCACAAAAC
CCTCTGCAAATGTCCTTGCCAATTCACCCAAAGTGATTAATATCAATACAGCCAGTGAAGCACAGCTTACACAGCTTGAT
GGTATCGGCGCCAAAAAAGCCCAACAAATTATTTTATACCGGCAAATGATAGCGCCGTTTGCCACAGCGGATGACCTAGC
CAACGTCAAAGGTATCGGCAAAGCGACTGTCGATAAAAATCGCCACCGCATTATCACCCAATAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_3)

(65-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378QBU2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE1/comEA Haemophilus influenzae Rd KW20

40

90.551

0.362