Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   HRJ47_RS17310 Genome accession   NZ_CP054137
Coordinates   3552189..3554417 (+) Length   742 a.a.
NCBI ID   WP_086400315.1    Uniprot ID   -
Organism   Acinetobacter pittii strain JXA13     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3547189..3559417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRJ47_RS17285 (HRJ47_17275) lnt 3547639..3549198 (+) 1560 WP_086611609.1 apolipoprotein N-acyltransferase -
  HRJ47_RS17290 (HRJ47_17280) csaA 3549200..3549538 (-) 339 WP_086611610.1 tRNA-binding protein -
  HRJ47_RS17295 (HRJ47_17285) - 3549684..3550028 (-) 345 WP_086354669.1 hypothetical protein -
  HRJ47_RS17300 (HRJ47_17290) gspG 3550296..3550811 (-) 516 WP_017402575.1 type II secretion system major pseudopilin GspG -
  HRJ47_RS17305 (HRJ47_17295) gspF 3550835..3552040 (-) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  HRJ47_RS17310 (HRJ47_17300) priA 3552189..3554417 (+) 2229 WP_086400315.1 primosomal protein N' Machinery gene
  HRJ47_RS17315 (HRJ47_17305) kefB 3554494..3556338 (+) 1845 WP_086400316.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  HRJ47_RS17320 (HRJ47_17310) hslO 3556502..3557377 (+) 876 WP_086400317.1 Hsp33 family molecular chaperone HslO -
  HRJ47_RS17325 (HRJ47_17315) - 3557516..3558127 (+) 612 WP_086400318.1 LysE family translocator -
  HRJ47_RS17330 (HRJ47_17320) cbpA 3558274..3559230 (+) 957 WP_086400319.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84069.81 Da        Isoelectric Point: 8.4592

>NTDB_id=451056 HRJ47_RS17310 WP_086400315.1 3552189..3554417(+) (priA) [Acinetobacter pittii strain JXA13]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEQPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVELAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVILGSATPSIDSYYLVETGKLTSLQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGEIVDIWGPIPAPMERKAGRYRAHMVILSTERARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=451056 HRJ47_RS17310 WP_086400315.1 3552189..3554417(+) (priA) [Acinetobacter pittii strain JXA13]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGGCGCCAAAACCTGA
TTGGCATCATTACTGAAAAAGTTGATCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GACGAACAACCTATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCAGCTCAGTATTACCAATTTCCAATTGGTGA
GGTCATGCAAACTGCCCTACCCGCGTTATTGCGTCAGGGCAAACCGATGGATGTTTTGTTCCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGCTCTGTTAAGCAACAAGACGCGTATCAAATTTTAAAATTACACCCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCACACGATTTTAGCCCATCGCCTGTTGAATTGGCACAAATGCCGCTTACACTCAATGAAGATCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTGCTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTCCCAGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAGTCTCGTTTTAACTGTGATATTGCTCTATTACACTCGGGCCTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCCCAGACTGGCAAAGCATCTATTATTTTAGGAACACGCTCTGCCATCTATACGCCA
CTGCCACGTTTGGGCTTAATCATTTTAGATGAAGAGCATGACCTGTCTTATAAGCAACAAGAAGGCTTCCGCTACCATGC
ACGTGATGTCGCACTGTACCGAGGCCACTTACAAAACTGTCCTGTTATTTTAGGTTCAGCAACACCGAGCATCGATAGTT
ATTATTTGGTCGAAACTGGTAAATTAACTTCACTGCAACTTAATCAACGTGCAGGCCATGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAACCATTAATCGAACAGATTAAAAATACCCTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTAGTCTGTGAAAGTTGTGGATGGCAAGCAA
ATTGTCCACATTGTGATGCCCATTTTACTTTGCATACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGCACTGTT
CATCGCTTGCCCGATCACTGCCCTGAATGCCAGCAAAAAAGCCTGAAAACCTTAGGTGCTGGAACAGCTAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGACTATGATGTAATTCGGGTTGACCGTGACAGCACCAGTCGTGTCGGTAGCTGGCAAA
AAATCTATGATCGTATTCATCAAAACAAACCAACAATTTTGCTTGGCACTCAAATGTTGGCAAAAGGTCACCATTTCCCA
CACGTGACTTTGGTTGCTATTTTAGATATTGATGCTGGGTTACTGAGTGTCGACATTCGTGCGCCAGAACGTACTGCACA
GTTAATTGTACAAGTCGCGGGTCGTGCAGGTCGTGGTGAACATAAAGGCCATGTTTATTTACAGACCTTAAGACCAGATC
ATCCATTACTCACCACACTCATCGAAAAAGATTATCGGGCAGTTGCTAAACAGACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCACCTTATCGTTATGCAGTACTGATACGTGCAGAATCTAAAGATCGTGACTATACCTTACATTTTTTAAATGAAGC
GGCGGAACAATTACGCCAAATTGCAGGTGAAATTGTTGATATTTGGGGTCCGATTCCAGCACCGATGGAACGTAAAGCTG
GGCGCTACCGCGCCCACATGGTAATTTTATCTACTGAACGTGCTCGCCTACATTTTTACTTAAGACAATGGTGGTCACAA
TTGGTTCATGCTCCACGGCAGCATCAACTCAGATTATCAATTGATGTTGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

97.978

100

0.98