Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   HRJ37_RS07295 Genome accession   NZ_CP054136
Coordinates   1417994..1418575 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain 11-1-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1412994..1423575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HRJ37_RS07270 (HRJ37_07270) - 1413662..1414840 (+) 1179 WP_048001606.1 N-acetyldiaminopimelate deacetylase -
  HRJ37_RS07275 (HRJ37_07275) - 1414891..1415133 (+) 243 WP_024424725.1 YkuS family protein -
  HRJ37_RS07280 (HRJ37_07280) - 1415156..1415965 (-) 810 WP_058337402.1 mechanosensitive ion channel family protein -
  HRJ37_RS07285 (HRJ37_07285) ahpA 1416237..1416779 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  HRJ37_RS07290 (HRJ37_07290) - 1417055..1417513 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  HRJ37_RS07295 (HRJ37_07295) rok 1417994..1418575 (+) 582 WP_007498648.1 hypothetical protein Regulator
  HRJ37_RS07300 (HRJ37_07300) - 1418638..1419555 (-) 918 WP_041507373.1 hypothetical protein -
  HRJ37_RS07305 (HRJ37_07305) - 1419639..1420220 (+) 582 WP_173407973.1 molybdenum cofactor guanylyltransferase -
  HRJ37_RS07310 (HRJ37_07310) - 1420250..1421266 (+) 1017 WP_173407974.1 thiazole biosynthesis adenylyltransferase ThiF -
  HRJ37_RS07315 (HRJ37_07315) glp 1421276..1422550 (+) 1275 WP_173407975.1 gephyrin-like molybdotransferase Glp -
  HRJ37_RS07320 (HRJ37_07320) mobB 1422532..1423059 (+) 528 WP_045034297.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  HRJ37_RS07325 (HRJ37_07325) - 1423052..1423543 (+) 492 WP_045034216.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=450986 HRJ37_RS07295 WP_007498648.1 1417994..1418575(+) (rok) [Bacillus altitudinis strain 11-1-1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=450986 HRJ37_RS07295 WP_007498648.1 1417994..1418575(+) (rok) [Bacillus altitudinis strain 11-1-1]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGAACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782