Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HQ912_RS26545 Genome accession   NZ_CP054128
Coordinates   5985375..5985803 (-) Length   142 a.a.
NCBI ID   WP_047225997.1    Uniprot ID   -
Organism   Pseudomonas sp. MPDS     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5980375..5990803
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HQ912_RS26530 (HQ912_26530) - 5982138..5984198 (-) 2061 WP_173407474.1 methyl-accepting chemotaxis protein -
  HQ912_RS26535 (HQ912_26535) - 5984412..5984951 (-) 540 WP_047225996.1 chemotaxis protein CheW -
  HQ912_RS26540 (HQ912_26540) pilH 5984962..5985327 (-) 366 WP_047226188.1 twitching motility response regulator PilH -
  HQ912_RS26545 (HQ912_26545) pilG 5985375..5985803 (-) 429 WP_047225997.1 PleD family two-component system response regulator Regulator
  HQ912_RS26550 (HQ912_26550) gshB 5986027..5986980 (+) 954 WP_047225998.1 glutathione synthase -
  HQ912_RS26555 (HQ912_26555) - 5987058..5987954 (+) 897 WP_047225999.1 energy transducer TonB -
  HQ912_RS26560 (HQ912_26560) - 5988133..5988702 (+) 570 WP_047226000.1 YqgE/AlgH family protein -
  HQ912_RS26565 (HQ912_26565) ruvX 5988702..5989139 (+) 438 WP_047226001.1 Holliday junction resolvase RuvX -
  HQ912_RS26570 (HQ912_26570) pyrR 5989225..5989731 (+) 507 WP_047226002.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HQ912_RS26575 (HQ912_26575) - 5989756..5990760 (+) 1005 WP_047226003.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15550.06 Da        Isoelectric Point: 7.9553

>NTDB_id=450936 HQ912_RS26545 WP_047225997.1 5985375..5985803(-) (pilG) [Pseudomonas sp. MPDS]
MAEHLTQQQPSALKVMVIDDSKTIRRTAETLLRNVGCEVITAVDGFDALAKIADHHPGIIFVDIMMPRLDGYQTCALIKN
NSVFKATPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLGAIRAHVPGFAAVQPHQAH

Nucleotide


Download         Length: 429 bp        

>NTDB_id=450936 HQ912_RS26545 WP_047225997.1 5985375..5985803(-) (pilG) [Pseudomonas sp. MPDS]
ATGGCAGAGCATCTTACGCAGCAGCAACCCAGCGCCTTGAAGGTCATGGTCATCGACGACTCGAAGACCATCCGCCGCAC
CGCCGAGACCTTGTTGCGCAACGTGGGTTGCGAGGTCATCACGGCGGTCGATGGCTTCGATGCCCTGGCCAAGATCGCCG
ACCATCATCCGGGCATTATCTTTGTCGACATCATGATGCCGCGCCTGGACGGTTACCAGACTTGTGCCCTGATCAAGAAC
AACAGCGTTTTCAAGGCCACGCCGGTGATCATGTTGTCGTCCCGGGACGGTTTGTTCGACAAGGCCAAGGGGCGCATCGT
CGGCTCCGATCAGTTTTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCGATACGGGCTCATGTTCCGGGCTTTG
CCGCTGTCCAGCCGCACCAGGCACATTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.814

83.099

0.655