Detailed information NTG0450898

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HRJ57_RS03025
• Genome accession: NZ_CP054125
• Coordinates: 597475..598578 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain NZ3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 592475..603578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRJ57_RS02995 (HRJ57_02965)	-	592521..593471 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
HRJ57_RS03000 (HRJ57_02970)	-	593465..593950 (+)	486	Protein_586	ATP-binding cassette domain-containing protein	-
HRJ57_RS03005 (HRJ57_02975)	phnE	593947..594837 (+)	891	WP_033446133.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ57_RS03010 (HRJ57_02980)	phnE	594834..595655 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ57_RS03020 (HRJ57_02990)	-	595830..597428 (+)	1599	Protein_589	CYTH and CHAD domain-containing protein	-
HRJ57_RS03025 (HRJ57_02995)	pilA	597475..598578 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
HRJ57_RS03030 (HRJ57_03000)	rsmD	598654..599274 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HRJ57_RS03035 (HRJ57_03005)	coaD	599295..599804 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
HRJ57_RS03040 (HRJ57_03010)	-	599859..600110 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HRJ57_RS03045 (HRJ57_03015)	-	600174..601307 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
HRJ57_RS03050 (HRJ57_03020)	-	601315..601701 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=450898 HRJ57_RS03025 WP_023853086.1 597475..598578(-) (pilA) [Bordetella pertussis strain NZ3]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=450898 HRJ57_RS03025 WP_023853086.1 597475..598578(-) (pilA) [Bordetella pertussis strain NZ3]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507