Detailed information NTG0450856

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HRJ67_RS17470
• Genome accession: NZ_CP054117
• Coordinates: 3645629..3646732 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain NZ13
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3640629..3651732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRJ67_RS17445 (HRJ67_17350)	-	3642506..3642892 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
HRJ67_RS17450 (HRJ67_17355)	-	3642900..3644033 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
HRJ67_RS17455 (HRJ67_17360)	-	3644097..3644348 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HRJ67_RS17460 (HRJ67_17365)	coaD	3644403..3644912 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
HRJ67_RS17465 (HRJ67_17370)	rsmD	3644933..3645553 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HRJ67_RS17470 (HRJ67_17375)	pilA	3645629..3646732 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
HRJ67_RS17475 (HRJ67_17380)	-	3646779..3648377 (-)	1599	Protein_3438	CYTH and CHAD domain-containing protein	-
HRJ67_RS17485 (HRJ67_17385)	phnE	3648552..3649373 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ67_RS17490 (HRJ67_17390)	phnE	3649370..3650260 (-)	891	WP_033446133.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ67_RS17495 (HRJ67_17395)	-	3650257..3650742 (-)	486	Protein_3441	ATP-binding cassette domain-containing protein	-
HRJ67_RS17500 (HRJ67_17400)	-	3650736..3651686 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=450856 HRJ67_RS17470 WP_023853086.1 3645629..3646732(+) (pilA) [Bordetella pertussis strain NZ13]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=450856 HRJ67_RS17470 WP_023853086.1 3645629..3646732(+) (pilA) [Bordetella pertussis strain NZ13]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507