Detailed information NTG0450820

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HRJ71_RS02995
• Genome accession: NZ_CP054113
• Coordinates: 595373..596476 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain NZ17
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 590373..601476

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRJ71_RS02965 (HRJ71_02940)	-	590418..591368 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
HRJ71_RS02970 (HRJ71_02945)	-	591362..591847 (+)	486	Protein_578	ATP-binding cassette domain-containing protein	-
HRJ71_RS02975 (HRJ71_02950)	phnE	591844..592734 (+)	891	WP_033446133.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ71_RS02980 (HRJ71_02955)	phnE	592731..593552 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ71_RS02990 (HRJ71_02965)	-	593728..595326 (+)	1599	Protein_581	CYTH and CHAD domain-containing protein	-
HRJ71_RS02995 (HRJ71_02970)	pilA	595373..596476 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
HRJ71_RS03000 (HRJ71_02975)	rsmD	596552..597172 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HRJ71_RS03005 (HRJ71_02980)	coaD	597193..597702 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
HRJ71_RS03010 (HRJ71_02985)	-	597757..598008 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HRJ71_RS03015 (HRJ71_02990)	-	598072..599205 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
HRJ71_RS03020 (HRJ71_02995)	-	599213..599599 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=450820 HRJ71_RS02995 WP_023853086.1 595373..596476(-) (pilA) [Bordetella pertussis strain NZ17]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=450820 HRJ71_RS02995 WP_023853086.1 595373..596476(-) (pilA) [Bordetella pertussis strain NZ17]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507