Detailed information NTG0450817

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HRJ72_RS16575
• Genome accession: NZ_CP054112
• Coordinates: 3459041..3460144 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain NZ18
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3454041..3465144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRJ72_RS16550 (HRJ72_16440)	-	3455918..3456304 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
HRJ72_RS16555 (HRJ72_16445)	-	3456312..3457445 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
HRJ72_RS16560 (HRJ72_16450)	-	3457509..3457760 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HRJ72_RS16565 (HRJ72_16455)	coaD	3457815..3458324 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
HRJ72_RS16570 (HRJ72_16460)	rsmD	3458345..3458965 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HRJ72_RS16575 (HRJ72_16465)	pilA	3459041..3460144 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
HRJ72_RS16580 (HRJ72_16470)	-	3460191..3461789 (-)	1599	Protein_3261	CYTH and CHAD domain-containing protein	-
HRJ72_RS16590 (HRJ72_16475)	phnE	3461965..3462786 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ72_RS16595 (HRJ72_16480)	phnE	3462783..3463673 (-)	891	WP_033446133.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ72_RS16600 (HRJ72_16485)	-	3463670..3464155 (-)	486	Protein_3264	ATP-binding cassette domain-containing protein	-
HRJ72_RS16605 (HRJ72_16490)	-	3464149..3465099 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=450817 HRJ72_RS16575 WP_023853086.1 3459041..3460144(+) (pilA) [Bordetella pertussis strain NZ18]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=450817 HRJ72_RS16575 WP_023853086.1 3459041..3460144(+) (pilA) [Bordetella pertussis strain NZ18]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507