Detailed information NTG0450739

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HRJ82_RS16695
• Genome accession: NZ_CP054102
• Coordinates: 3460114..3461217 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain NZ28
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3455114..3466217

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRJ82_RS16670 (HRJ82_16570)	-	3456991..3457377 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
HRJ82_RS16675 (HRJ82_16575)	-	3457385..3458518 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
HRJ82_RS16680 (HRJ82_16580)	-	3458582..3458833 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HRJ82_RS16685 (HRJ82_16585)	coaD	3458888..3459397 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
HRJ82_RS16690 (HRJ82_16590)	rsmD	3459418..3460038 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HRJ82_RS16695 (HRJ82_16595)	pilA	3460114..3461217 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
HRJ82_RS16700 (HRJ82_16600)	-	3461264..3462862 (-)	1599	Protein_3291	CYTH and CHAD domain-containing protein	-
HRJ82_RS16710 (HRJ82_16605)	phnE	3463036..3463857 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ82_RS16715 (HRJ82_16610)	phnE	3463854..3464744 (-)	891	WP_033446133.1	phosphonate ABC transporter, permease protein PhnE	-
HRJ82_RS16720 (HRJ82_16615)	-	3464741..3465226 (-)	486	Protein_3294	ATP-binding cassette domain-containing protein	-
HRJ82_RS16725 (HRJ82_16620)	-	3465220..3466170 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=450739 HRJ82_RS16695 WP_023853086.1 3460114..3461217(+) (pilA) [Bordetella pertussis strain NZ28]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=450739 HRJ82_RS16695 WP_023853086.1 3460114..3461217(+) (pilA) [Bordetella pertussis strain NZ28]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507