Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   I6G43_RS05345 Genome accession   NZ_CP065706
Coordinates   1121432..1121896 (+) Length   154 a.a.
NCBI ID   WP_001135756.1    Uniprot ID   A0ABU5G1H7
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1116432..1126896
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS05320 (I6G43_05320) - 1116907..1117821 (+) 915 WP_038806123.1 peptidase -
  I6G43_RS05325 (I6G43_05325) - 1117954..1118496 (+) 543 WP_038806122.1 ClbS/DfsB family four-helix bundle protein -
  I6G43_RS09325 - 1118777..1119280 (+) 504 WP_232234259.1 hypothetical protein -
  I6G43_RS05330 (I6G43_05330) - 1119371..1119982 (+) 612 WP_038806121.1 hypothetical protein -
  I6G43_RS05335 (I6G43_05335) - 1120013..1120705 (+) 693 WP_038806120.1 YjjG family noncanonical pyrimidine nucleotidase -
  I6G43_RS05340 (I6G43_05340) - 1120769..1121422 (+) 654 WP_038806119.1 uracil-DNA glycosylase -
  I6G43_RS05345 (I6G43_05345) mutX 1121432..1121896 (+) 465 WP_001135756.1 NUDIX hydrolase Machinery gene
  I6G43_RS05350 (I6G43_05350) - 1121909..1123177 (+) 1269 WP_038806118.1 dihydroorotase -
  I6G43_RS05355 (I6G43_05355) - 1123219..1124574 (+) 1356 WP_038806117.1 MATE family efflux transporter -
  I6G43_RS05360 (I6G43_05360) - 1124728..1125696 (+) 969 WP_038806116.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  I6G43_RS05365 (I6G43_05365) - 1125713..1126705 (+) 993 WP_038806115.1 alpha-ketoacid dehydrogenase subunit beta -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17754.12 Da        Isoelectric Point: 4.2639

>NTDB_id=450736 I6G43_RS05345 WP_001135756.1 1121432..1121896(+) (mutX) [Streptococcus oralis strain FDAARGOS_886]
MPQLATICYIDNGKELLMLHRNKKPNDVHAGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=450736 I6G43_RS05345 WP_001135756.1 1121432..1121896(+) (mutX) [Streptococcus oralis strain FDAARGOS_886]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAACGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAGCCTAATGA
TGTCCATGCGGGTAAATGGATTGGTGTGGGTGGTAAGCTAGAGCGAGGAGAGACACCTCAGGAGTGCGCAGCGCGTGAAA
TCCTCGAAGAGACAGGCCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCAGAATTCACGCCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACAGAGTTTGAGGGTGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGATGAAGTTTTGAGCAAGCCAACTTGGGAGGGTGATCACACTTTTGTTGAGTGGCTTTTAGAGGACAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.052

100

0.981