Detailed information NTG0450612

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HRK11_RS03015
• Genome accession: NZ_CP054075
• Coordinates: 595376..596479 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain NZ56
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 590376..601479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRK11_RS02985 (HRK11_02955)	-	590421..591371 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
HRK11_RS02990 (HRK11_02960)	-	591365..591850 (+)	486	Protein_584	ATP-binding cassette domain-containing protein	-
HRK11_RS02995 (HRK11_02965)	phnE	591847..592737 (+)	891	WP_033446133.1	phosphonate ABC transporter, permease protein PhnE	-
HRK11_RS03000 (HRK11_02970)	phnE	592734..593555 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
HRK11_RS03010 (HRK11_02980)	-	593731..595329 (+)	1599	Protein_587	CYTH and CHAD domain-containing protein	-
HRK11_RS03015 (HRK11_02985)	pilA	595376..596479 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
HRK11_RS03020 (HRK11_02990)	rsmD	596555..597175 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HRK11_RS03025 (HRK11_02995)	coaD	597196..597705 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
HRK11_RS03030 (HRK11_03000)	-	597760..598011 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HRK11_RS03035 (HRK11_03005)	-	598075..599208 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
HRK11_RS03040 (HRK11_03010)	-	599216..599602 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=450612 HRK11_RS03015 WP_023853086.1 595376..596479(-) (pilA) [Bordetella pertussis strain NZ56]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=450612 HRK11_RS03015 WP_023853086.1 595376..596479(-) (pilA) [Bordetella pertussis strain NZ56]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507