Detailed information NTG0450586

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HRK13_RS03015
• Genome accession: NZ_CP054072
• Coordinates: 596348..597379 (-)
• Length: 343 a.a.
• NCBI ID: WP_029443939.1
• Uniprot ID: -
• Organism: Bordetella pertussis strain NZ59
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 591348..602379

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRK13_RS02985 (HRK13_02960)	-	591392..592342 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
HRK13_RS02990 (HRK13_02965)	-	592336..592821 (+)	486	Protein_581	ATP-binding cassette domain-containing protein	-
HRK13_RS02995 (HRK13_02970)	phnE	592818..593708 (+)	891	WP_033446133.1	phosphonate ABC transporter, permease protein PhnE	-
HRK13_RS03000 (HRK13_02975)	phnE	593705..594526 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
HRK13_RS03010 (HRK13_02985)	-	594703..596301 (+)	1599	Protein_584	CYTH and CHAD domain-containing protein	-
HRK13_RS03015 (HRK13_02990)	pilA	596348..597379 (-)	1032	WP_029443939.1	signal recognition particle-docking protein FtsY	Machinery gene
HRK13_RS03020 (HRK13_02995)	rsmD	597526..598146 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HRK13_RS03025 (HRK13_03000)	coaD	598167..598676 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
HRK13_RS03030 (HRK13_03005)	-	598731..598982 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HRK13_RS03035 (HRK13_03010)	-	599046..600179 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
HRK13_RS03040 (HRK13_03015)	-	600187..600573 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 36010.11 Da
• Isoelectric Point: 5.7840

>NTDB_id=450586 HRK13_RS03015 WP_029443939.1 596348..597379(-) (pilA) [Bordetella pertussis strain NZ59]
MDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESAL
IMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRAQPLVVMIAGVNGAGKTTSIGKLAH
TFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGRARNVGVVMVDTAGRLPTQLHLMEE
LKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIG
VGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1032 bp

>NTDB_id=450586 HRK13_RS03015 WP_029443939.1 596348..597379(-) (pilA) [Bordetella pertussis strain NZ59]
GTGGACGCAGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGA
GCCGCAGCCACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGC
GCACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTG
ATCATGGCCGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGA
CGATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGG
GGCGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCAT
ACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGA
ATGGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATG
CCGGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAA
TTGAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACAC
CGGCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACG
GCACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGC
GTGGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (139-341)

• SRP54-type protein, helical bundle domain (SRP54_N) (59-118)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	100	0.542