Detailed information NTG0450495

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: I6G80_RS21620
• Genome accession: NZ_CP065647
• Coordinates: 4014205..4015323 (-)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain FDAARGOS_923
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 4009205..4020323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G80_RS21590 (I6G80_21580)	-	4009914..4011140 (-)	1227	WP_009328954.1	metallophosphoesterase family protein	-
I6G80_RS21595 (I6G80_21585)	-	4011260..4012528 (-)	1269	WP_003180232.1	ABC transporter permease	-
I6G80_RS21600 (I6G80_21590)	-	4012521..4013417 (-)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
I6G80_RS21605 (I6G80_21595)	-	4013535..4013720 (+)	186	WP_003180228.1	YhzD family protein	-
I6G80_RS21610 (I6G80_21600)	-	4013795..4014073 (-)	279	WP_003180226.1	hypothetical protein	-
I6G80_RS21615 (I6G80_21605)	-	4014078..4014215 (-)	138	WP_016886158.1	hypothetical protein	-
I6G80_RS21620 (I6G80_21610)	rapC	4014205..4015323 (-)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
I6G80_RS21625 (I6G80_21615)	-	4015450..4016226 (-)	777	WP_011197707.1	enoyl-CoA hydratase	-
I6G80_RS21630 (I6G80_21620)	-	4016427..4016756 (+)	330	WP_016886161.1	hypothetical protein	-
I6G80_RS21635 (I6G80_21625)	-	4016821..4017318 (+)	498	Protein_4198	cation:proton antiporter regulatory subunit	-
I6G80_RS21640 (I6G80_21630)	-	4017325..4018536 (+)	1212	WP_003180218.1	cation:proton antiporter	-
I6G80_RS21645 (I6G80_21635)	-	4018618..4020123 (-)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=450495 I6G80_RS21620 WP_009328956.1 4014205..4015323(-) (rapC) [Bacillus licheniformis strain FDAARGOS_923]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=450495 I6G80_RS21620 WP_009328956.1 4014205..4015323(-) (rapC) [Bacillus licheniformis strain FDAARGOS_923]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374