Detailed information NTG0450435

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: I6G80_RS13335
• Genome accession: NZ_CP065647
• Coordinates: 2488638..2489768 (+)
• Length: 376 a.a.
• NCBI ID: WP_009327959.1
• Uniprot ID: Q65HV9
• Organism: Bacillus licheniformis strain FDAARGOS_923
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2483638..2494768

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G80_RS13315 (I6G80_13315)	lysA	2484321..2485640 (+)	1320	WP_003183141.1	diaminopimelate decarboxylase	-
I6G80_RS13320 (I6G80_13320)	-	2485879..2486739 (+)	861	WP_003183139.1	poly-gamma-glutamate hydrolase family protein	-
I6G80_RS13325 (I6G80_13325)	-	2486736..2487839 (-)	1104	WP_017473930.1	DUF1002 domain-containing protein	-
I6G80_RS13330 (I6G80_13330)	-	2487969..2488406 (+)	438	WP_003183133.1	peptidylprolyl isomerase	-
I6G80_RS13335 (I6G80_13335)	rapC	2488638..2489768 (+)	1131	WP_009327959.1	Rap family tetratricopeptide repeat protein	Regulator
I6G80_RS13340 (I6G80_13340)	-	2489758..2490063 (+)	306	WP_003183128.1	hypothetical protein	-
I6G80_RS13345 (I6G80_13345)	-	2490222..2490659 (+)	438	WP_003183127.1	Hsp20/alpha crystallin family protein	-
I6G80_RS13350 (I6G80_13350)	-	2490786..2492972 (+)	2187	WP_011198084.1	RNA ligase	-
I6G80_RS13355 (I6G80_13355)	-	2493235..2493579 (+)	345	WP_003183123.1	hypothetical protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44264.11 Da
• Isoelectric Point: 4.7199

>NTDB_id=450435 I6G80_RS13335 WP_009327959.1 2488638..2489768(+) (rapC) [Bacillus licheniformis strain FDAARGOS_923]
MSVKIPSTAVGVKINDWYNAIRKFNVTDAEMLKAEIEREISQMEEDQDLLLYYALMEFRHRIMLDYVKPLEEGETPPDFS
EILKDIEDEQGKLTGLLEYYFNFFRGMYEYKNHDYIKAISFYRRAEKKLLHVEDEIERAEFHFKMAEVFYHMKQSHVSMN
YALQAIETYQAHETYTVRRIQCEFVIAGNYDDLESNEKALSHLEKALKLSQQEGQLILEGHTYYNLGNCYYKMGDFDQAA
EYFNRAAAIYQEESSDILPKAFFSLALAYFKLKQLEKADDALNKGIDIARRSDDAIYLSKFHFLKALYVDDDGRAPMLET
FQLLGSKKMYPDIEDLALEAAEYYNEIGRLSDSVYFYQTVFSARKQMKKGDWSYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=450435 I6G80_RS13335 WP_009327959.1 2488638..2489768(+) (rapC) [Bacillus licheniformis strain FDAARGOS_923]
GTGAGCGTAAAAATCCCATCGACGGCAGTCGGCGTAAAAATTAATGACTGGTATAACGCGATACGTAAATTCAACGTCAC
GGACGCCGAAATGCTGAAGGCAGAAATTGAGCGCGAAATTTCTCAAATGGAAGAGGATCAAGACTTATTATTGTATTACG
CCTTAATGGAATTCAGACACAGAATCATGCTTGATTACGTAAAACCTTTGGAAGAAGGCGAAACCCCGCCTGACTTTTCT
GAAATATTAAAAGATATCGAAGATGAACAAGGAAAGCTGACAGGCCTGCTCGAATATTATTTTAACTTTTTTAGAGGGAT
GTATGAATATAAAAACCATGATTATATTAAAGCGATCTCTTTTTACAGGCGCGCCGAAAAAAAGCTGCTGCACGTCGAGG
ACGAAATAGAGAGAGCCGAGTTTCATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAGAGCCATGTGTCGATGAAC
TATGCGCTTCAAGCGATTGAAACCTATCAGGCGCATGAAACCTACACGGTTCGGAGAATCCAATGCGAGTTCGTCATCGC
AGGGAACTATGACGATTTAGAGTCGAATGAAAAAGCGCTGTCACATCTTGAAAAGGCGCTGAAGCTTTCACAGCAAGAAG
GCCAGCTCATATTGGAAGGACACACCTATTACAATTTGGGAAACTGCTATTATAAGATGGGGGATTTCGATCAGGCAGCC
GAGTACTTCAACAGGGCTGCTGCGATTTATCAAGAAGAGTCATCAGATATTCTTCCAAAAGCGTTTTTCAGTCTTGCACT
TGCATATTTCAAGTTGAAGCAGCTGGAAAAGGCGGATGACGCGTTAAACAAAGGAATTGACATCGCCCGCCGATCAGACG
ATGCGATCTACCTTTCAAAATTTCATTTTTTAAAAGCTTTGTATGTTGATGATGACGGCAGGGCTCCAATGCTGGAGACA
TTTCAGCTGCTCGGGTCAAAAAAGATGTATCCCGATATTGAGGACTTGGCATTGGAAGCAGCTGAATACTATAATGAAAT
TGGGCGCTTGAGCGACTCTGTTTATTTCTATCAAACGGTATTCAGTGCTCGAAAACAAATGAAAAAAGGGGACTGGTCGT
ATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (260-290)

• Tetratricopeptide repeat (TPR_12) (190-252)

3D structure

• AlphaFold DB: Q65HV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	47.745	100	0.479
rapF	Bacillus subtilis subsp. subtilis str. 168	44.619	100	0.452