Detailed information NTG0450226

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HQN79_RS01565
• Genome accession: NZ_CP054020
• Coordinates: 343268..344542 (-)
• Length: 424 a.a.
• NCBI ID: WP_173283948.1
• Uniprot ID: A0A7D4NPZ2
• Organism: Thiomicrorhabdus xiamenensis strain G2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 338268..349542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HQN79_RS01535 (HQN79_01535)	-	338879..339640 (+)	762	WP_173283943.1	type III pantothenate kinase	-
HQN79_RS01545 (HQN79_01545)	fabA	340016..340531 (+)	516	WP_173283944.1	3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA	-
HQN79_RS01550 (HQN79_01550)	fabB	340535..341755 (+)	1221	WP_173283945.1	beta-ketoacyl-ACP synthase I	-
HQN79_RS01555 (HQN79_01555)	-	341867..342457 (-)	591	WP_173283946.1	hypothetical protein	-
HQN79_RS01560 (HQN79_01560)	-	342444..343265 (-)	822	WP_173283947.1	DUF2914 domain-containing protein	-
HQN79_RS01565 (HQN79_01565)	pilA	343268..344542 (-)	1275	WP_173283948.1	signal recognition particle-docking protein FtsY	Machinery gene
HQN79_RS01570 (HQN79_01570)	-	344688..346079 (+)	1392	WP_173283949.1	M16 family metallopeptidase	-
HQN79_RS01575 (HQN79_01575)	-	346079..347386 (+)	1308	WP_173283950.1	M16 family metallopeptidase	-
HQN79_RS01580 (HQN79_01580)	-	347450..349222 (-)	1773	WP_173283951.1	GNAT family N-acyltransferase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 46124.11 Da
• Isoelectric Point: 4.5538

>NTDB_id=450226 HQN79_RS01565 WP_173283948.1 343268..344542(-) (pilA) [Thiomicrorhabdus xiamenensis strain G2]
MFSFFRKKKQTHETEENNDSNALNEIPAEEAQPAPEQAREEVQEEAPAASDAIREEAAEVVQKTESPSAETVLAAETKPD
ESPAETTIPENTPETEPKQPTQAATAAAEEPQKKKGLFARLKDGLSKTRKSFTDSLSSLILGKKEIDADLLDDLEMILLT
ADVGIDATDRIIQNLTDQVSRKELKDPQALIDALKTQLQEIIDPMSRPLEIDDFLKANDGPYIILMVGINGVGKTTTIGK
LAKKFQMEGKSVMLAAGDTFRAAAVEQLQTWGERNNVPVIAQKTGADSAAVIFDAVQSAKAKNIDVLIADTAGRLHTQSN
LMEELKKVKRVIGKVDATAPHEVMLVIDAGTGQNALNQTKQFHEAVQVSGITLTKLDGTAKGGIVYALAEQSHIPIRFIG
VGEKIDDLRPFDSKDFTEALFDQK

Nucleotide

• Length: 1275 bp

>NTDB_id=450226 HQN79_RS01565 WP_173283948.1 343268..344542(-) (pilA) [Thiomicrorhabdus xiamenensis strain G2]
ATGTTTAGCTTTTTCCGCAAAAAGAAACAAACACACGAAACCGAAGAAAATAACGATAGTAATGCGCTAAACGAAATTCC
GGCGGAAGAGGCTCAGCCCGCCCCTGAACAAGCTAGAGAAGAAGTCCAAGAAGAAGCCCCGGCGGCATCCGATGCAATAC
GAGAAGAAGCAGCGGAAGTAGTACAAAAGACGGAATCCCCTTCTGCCGAAACGGTTCTTGCGGCAGAAACGAAGCCTGAC
GAATCGCCTGCGGAAACGACAATCCCCGAAAATACGCCAGAGACAGAGCCAAAGCAACCGACTCAAGCAGCGACCGCTGC
TGCCGAGGAACCGCAAAAGAAAAAAGGTCTCTTTGCCCGCCTCAAGGACGGTTTGAGCAAAACACGTAAAAGCTTTACCG
ATAGCCTGAGCAGCCTGATTCTCGGAAAAAAAGAAATCGACGCGGATCTGCTCGACGATCTGGAGATGATCTTGCTCACT
GCAGATGTCGGAATCGATGCCACCGACCGTATTATCCAGAATCTGACCGATCAGGTTTCGCGAAAGGAACTTAAAGATCC
ACAGGCACTGATTGACGCGCTAAAAACACAATTGCAGGAAATCATTGATCCTATGAGCCGTCCGCTGGAGATCGACGATT
TCCTGAAAGCCAACGACGGCCCTTATATCATTCTGATGGTCGGTATTAACGGGGTCGGCAAGACGACTACCATCGGTAAG
CTCGCCAAGAAATTCCAGATGGAAGGCAAATCAGTCATGCTGGCGGCCGGAGATACATTCCGCGCAGCGGCGGTCGAACA
GTTGCAGACTTGGGGCGAACGCAACAATGTCCCGGTTATCGCACAGAAAACCGGCGCCGATTCGGCTGCGGTTATCTTTG
ACGCCGTTCAGTCTGCCAAAGCAAAAAACATCGATGTGTTGATTGCCGATACCGCCGGACGCTTGCATACACAATCCAAC
CTGATGGAAGAGTTGAAAAAAGTGAAGCGCGTTATCGGTAAAGTTGACGCCACCGCTCCGCACGAAGTCATGCTGGTAAT
CGACGCAGGGACCGGACAGAATGCACTTAACCAAACCAAACAATTCCACGAAGCGGTTCAGGTTTCCGGGATCACATTGA
CCAAACTGGACGGAACTGCCAAGGGCGGGATTGTCTACGCCTTGGCGGAACAGTCGCACATTCCGATCCGTTTTATCGGT
GTCGGCGAAAAAATTGACGACCTGCGCCCGTTCGACAGCAAGGACTTTACCGAAGCCCTCTTTGATCAGAAGTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (222-421)

• SRP54-type protein, helical bundle domain (SRP54_N) (133-198)

3D structure

• AlphaFold DB: A0A7D4NPZ2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	47.717	100	0.493