Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   FOC68_RS08600 Genome accession   NZ_CP054006
Coordinates   1683106..1683771 (-) Length   221 a.a.
NCBI ID   WP_002449473.1    Uniprot ID   -
Organism   Staphylococcus hominis strain FDAARGOS_762     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1678106..1688771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC68_RS08580 (FOC68_08590) - 1678514..1679278 (-) 765 WP_002449398.1 DUF4064 domain-containing protein -
  FOC68_RS08585 (FOC68_08595) - 1679366..1681321 (-) 1956 WP_039984103.1 FtsX-like permease family protein -
  FOC68_RS08590 (FOC68_08600) - 1681323..1682072 (-) 750 WP_002449305.1 ABC transporter ATP-binding protein -
  FOC68_RS08595 (FOC68_08605) braS 1682204..1683100 (-) 897 WP_002449490.1 sensor histidine kinase Regulator
  FOC68_RS08600 (FOC68_08610) braR 1683106..1683771 (-) 666 WP_002449473.1 response regulator transcription factor Regulator
  FOC68_RS08605 (FOC68_08615) - 1683784..1683951 (-) 168 WP_002449377.1 hypothetical protein -
  FOC68_RS08610 (FOC68_08620) - 1684119..1684292 (-) 174 WP_002449232.1 hypothetical protein -
  FOC68_RS08615 (FOC68_08625) - 1684672..1686147 (+) 1476 WP_002449531.1 alkaline phosphatase -
  FOC68_RS08620 (FOC68_08630) - 1686256..1687191 (-) 936 WP_002449450.1 LCP family protein -
  FOC68_RS08625 (FOC68_08635) - 1687208..1687672 (-) 465 WP_002449339.1 hypothetical protein -
  FOC68_RS08630 (FOC68_08640) - 1687884..1687985 (-) 102 WP_017175470.1 SE2200 family small protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25380.14 Da        Isoelectric Point: 4.6475

>NTDB_id=450085 FOC68_RS08600 WP_002449473.1 1683106..1683771(-) (braR) [Staphylococcus hominis strain FDAARGOS_762]
MKVLIVEDDVVIAESLGNELSHWNYEVSIAKQFGNILEEFKTAEPELVLLDINLPTFNGYHWCQEIRKVSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLTVSNNEITVKGCKLVVDEATLYYNNDSVQLSFTELQILN
KLFQNEGKYVNRTAIIEKCWESENFIDDNTLAVNMTRLRKKLQSIGIVDFIETKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=450085 FOC68_RS08600 WP_002449473.1 1683106..1683771(-) (braR) [Staphylococcus hominis strain FDAARGOS_762]
ATGAAAGTATTGATTGTCGAAGATGATGTCGTCATTGCAGAAAGTCTAGGGAATGAACTCTCACATTGGAACTATGAAGT
GAGTATTGCTAAGCAGTTTGGTAATATTCTTGAAGAATTTAAAACTGCAGAACCTGAACTTGTGTTATTAGATATTAATT
TACCTACATTTAATGGTTATCATTGGTGCCAAGAGATACGTAAAGTATCTAATGTCCCAATTATTTTCATTAGTTCGCGT
ACTGACAATATGGATCAAATTATGGCAATTCAAATGGGGGGAGATGACTTTATTGAAAAGCCATTTAATTTGTCACTTAC
TATAGCGAAAATTCAAGCATTGCTACGTAGAACATATGATTTAACGGTTTCAAATAATGAAATTACTGTTAAAGGGTGTA
AACTCGTTGTTGATGAAGCCACACTATACTACAACAATGACTCTGTACAACTTTCGTTTACTGAACTACAAATCTTGAAT
AAATTATTTCAAAATGAAGGGAAATATGTCAATCGTACAGCAATCATCGAAAAATGTTGGGAATCAGAGAATTTTATTGA
TGATAATACGTTAGCAGTAAATATGACACGCCTACGTAAAAAGTTGCAATCTATCGGTATTGTTGATTTCATTGAGACAA
AGAAAAATGTAGGGTATAAGGTGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.923

100

0.769