Detailed information NTG0450050

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: I5367_RS16360
• Genome accession: NZ_CP065539
• Coordinates: 3340793..3343666 (-)
• Length: 957 a.a.
• NCBI ID: WP_012118558.1
• Uniprot ID: A7Z984
• Organism: Bacillus amyloliquefaciens strain DGL1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3335793..3348666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I5367_RS16335 (I5367_16335)	-	3338302..3338661 (-)	360	WP_007407446.1	phage holin family protein	-
I5367_RS16340 (I5367_16340)	-	3338662..3338856 (-)	195	WP_007407447.1	PspC domain-containing protein	-
I5367_RS16345 (I5367_16345)	-	3338861..3339958 (-)	1098	WP_007614045.1	DUF4097 family beta strand repeat-containing protein	-
I5367_RS16350 (I5367_16350)	-	3339983..3340309 (-)	327	WP_003151444.1	hypothetical protein	-
I5367_RS16355 (I5367_16355)	-	3340507..3340767 (+)	261	WP_012118557.1	hypothetical protein	-
I5367_RS16360 (I5367_16360)	uvrA	3340793..3343666 (-)	2874	WP_012118558.1	excinuclease ABC subunit UvrA	Machinery gene
I5367_RS16365 (I5367_16365)	uvrB	3343674..3345659 (-)	1986	WP_012118559.1	excinuclease ABC subunit UvrB	Machinery gene
I5367_RS16370 (I5367_16370)	-	3345835..3346071 (-)	237	WP_003151438.1	CsbA family protein	-

Sequence

Protein

• Length: 957 a.a.
• Molecular weight: 106117.37 Da
• Isoelectric Point: 6.4146

>NTDB_id=450050 I5367_RS16360 WP_012118558.1 3340793..3343666(-) (uvrA) [Bacillus amyloliquefaciens strain DGL1]
MAIDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEG
LSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIISGR
KGAHVKVLDQIRKQGYVRVRIDGEMAELSDDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
QEELMFSEHHACPLCGFSIGELEPRLFSFNSPFGACPTCDGLGLKLEVDPELVIPNPELSLKEHAIAPWTPISSQYYPQL
LQAVCRHYGIDMETPVKDLPKHQLDKVLYGSGDERIYFKYENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEQY
MSQKSCPTCKGYRLKKEALAVLVNGRHIGTITELSVGDALEFFKNLTLSEKDMQIADLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDI
GPGAGIHGGRVISAGTPEEVMNDADSLTGRYLSGAQFIPMPPERRKPDGRFIEIKGASENNLKKANAKFPLGTFTAVTGV
SGSGKSTLVNEILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN
IPKIKRKLQTLADVGLGYVTLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNG
DTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPEEVVEVKESYTGRYLKPVMERDKKRMKTLLAEKETAAT

Nucleotide

• Length: 2874 bp

>NTDB_id=450050 I5367_RS16360 WP_012118558.1 3340793..3343666(-) (uvrA) [Bacillus amyloliquefaciens strain DGL1]
ATGGCAATTGACCGGATCGAGGTGAAAGGCGCAAGGGCGCACAATTTAAAAAACATTGATGTAACGATTCCGCGGGATCA
GCTCGTCGTCGTGACGGGGCTGTCCGGATCGGGAAAATCATCCCTTGCCTTTGACACCATTTACGCGGAAGGACAGAGGC
GGTATGTTGAATCGCTTTCTGCCTATGCGCGCCAATTTTTAGGGCAGATGGATAAGCCGGACGTTGATGCGATCGAAGGG
CTTTCTCCGGCGATCAGCATTGACCAGAAAACGACAAGCCGCAATCCGCGGTCAACCGTCGGAACGGTAACGGAGATCTA
TGATTATCTCCGGCTGCTGTACGCGAGAGTCGGGAAACCGCACTGCCCGGAACACGGCATTGAAATTACGTCGCAAACGA
TTGAACAGATGGTTGACCGGATTCTTGAATATCCGGAGCGGACGAAGCTTCAAGTGCTTGCGCCGATCATCTCAGGCAGA
AAAGGCGCCCATGTCAAAGTGCTTGACCAAATCAGAAAGCAAGGTTACGTAAGGGTGCGGATTGACGGAGAAATGGCCGA
GCTTTCCGACGATATTGAACTTGAAAAAAACAAAAAGCATTCCATTGAAGTAGTCATTGACCGGATTGTCGTCAAGGAAG
GGGTTGCCGCCCGGCTTTCCGACTCACTGGAAACCGCGCTCCGCTTAGGGGAAGGCCGTGTCATGATAGATGTCATCGGT
CAGGAGGAGCTGATGTTCAGCGAGCATCACGCTTGTCCGCTGTGCGGTTTTTCTATCGGGGAGCTTGAACCCCGGCTGTT
TTCATTTAACAGTCCGTTCGGCGCCTGTCCGACTTGCGACGGTCTCGGCTTGAAGCTGGAAGTGGACCCTGAGCTCGTCA
TCCCCAATCCCGAGCTGTCATTAAAGGAACACGCCATCGCGCCGTGGACGCCGATCAGTTCACAATATTATCCGCAGCTG
CTTCAGGCGGTCTGCCGCCATTACGGCATTGATATGGAGACTCCGGTCAAAGACCTGCCGAAGCATCAGCTTGATAAAGT
GCTGTACGGCAGCGGCGATGAACGGATCTACTTTAAATACGAGAATGATTTCGGACAAGTGCGCGAAAATGAAATTGAAT
TTGAAGGTGTGCTGCGCAATATTGAGAGACGGTATAAGGAGACAAGCTCCGATTATATCCGTGAACAGATGGAGCAGTAC
ATGTCACAGAAATCGTGCCCGACGTGCAAAGGCTACCGGCTGAAGAAAGAAGCGCTTGCCGTTTTGGTCAACGGGCGCCA
TATCGGAACCATTACGGAGCTTTCTGTCGGCGACGCGCTTGAATTTTTCAAAAACCTGACGCTGTCTGAGAAAGATATGC
AGATTGCCGATTTAATTTTAAGAGAGATTGTAGAGCGGCTCAGCTTCTTAGATAAAGTGGGTCTTGATTATCTGACGCTG
AGCCGGGCGGCGGGAACGCTGTCAGGCGGAGAAGCCCAGCGCATCAGGCTTGCGACGCAGATCGGCTCTCGTTTGTCTGG
CGTCCTGTATATTCTTGATGAGCCGTCCATCGGCCTTCACCAGCGTGACAATGACCGTCTGATCAGCGCGCTGAAAAACA
TGAGGGATCTCGGCAACACACTGATTGTCGTTGAGCATGATGAAGATACGATGATGGCTGCCGATTATTTGATAGATATC
GGTCCGGGCGCCGGTATTCACGGCGGCCGCGTCATATCGGCGGGGACGCCAGAAGAAGTGATGAATGATGCGGACTCTCT
GACCGGACGCTATTTGTCAGGGGCTCAATTCATCCCGATGCCTCCGGAGAGAAGAAAGCCTGACGGCCGGTTCATTGAAA
TCAAAGGCGCTTCAGAAAACAACCTGAAAAAAGCGAACGCCAAATTCCCGCTCGGCACTTTTACGGCGGTGACAGGTGTG
TCCGGTTCCGGAAAAAGCACGCTTGTGAATGAAATTCTGCATAAGGCGCTTGCGCAAAAGCTTCATAAAGCCAAAGCGAA
ACCGGGAAGCCATAAAGAAATCAAAGGCCTTGACCACCTTGATAAGGTGATCGACATCGACCAGGCGCCGATCGGCCGGA
CACCGAGATCAAACCCGGCAACTTATACGGGCGTGTTTGATGATATCCGCGATGTATTCGCGCAGACAAATGAAGCAAAG
GTGCGCGGCTATAAAAAAGGCCGGTTCAGTTTTAATGTAAAAGGCGGGCGCTGTGAGGCCTGCCGCGGCGACGGCATCAT
CAAAATTGAGATGCATTTCCTTCCTGACGTGTACGTCCCGTGTGAAGTGTGCCACGGCAAACGTTACAACCGGGAGACGC
TTGAGGTCACATACAAAGGAAAAAGCATTTCTGACGTTCTGGATATGACGGTGGAAGATGCTCTGTCTTTCTTTGAAAAT
ATCCCGAAAATCAAACGCAAGCTTCAAACGCTTGCCGATGTCGGACTCGGGTATGTGACGCTCGGACAGCCGGCGACGAC
GCTGTCAGGCGGAGAAGCGCAGCGCGTTAAGCTTGCTTCCGAACTGCATAAGCGTTCCACAGGCCGGACGCTGTATATTC
TGGACGAACCGACGACAGGCCTCCACGTTGATGATATCGCAAGGCTATTGGTTGTGCTTCAAAGACTCGTCGATAACGGT
GATACCGTTTTGGTCATTGAACACAATCTCGACATCATTAAAACGGCGGACTACATCGTAGACCTGGGACCTGAAGGCGG
AGCGGGCGGCGGCACGATCGTAGCCTCCGGGACGCCTGAAGAAGTTGTCGAAGTGAAAGAATCATATACGGGCCGCTATC
TGAAACCGGTAATGGAACGTGATAAAAAACGGATGAAAACATTGCTGGCTGAAAAAGAAACGGCAGCCACATAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-858)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-399)

• UvrA interaction domain (UvrA_inter) (132-238)

3D structure

• AlphaFold DB: A7Z984

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae TIGR4	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae D39	69.091	97.701	0.675