Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FOC71_RS03850 Genome accession   NZ_CP053999
Coordinates   730208..730939 (+) Length   243 a.a.
NCBI ID   WP_003073841.1    Uniprot ID   -
Organism   Streptococcus intermedius strain FDAARGOS_769     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 725208..735939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC71_RS03820 (FOC71_03820) - 725493..726932 (+) 1440 WP_003073851.1 NCS2 family permease -
  FOC71_RS03825 (FOC71_03825) tsaE 727270..727710 (+) 441 WP_003073850.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FOC71_RS03830 (FOC71_03830) - 727703..728224 (+) 522 WP_003073848.1 GNAT family N-acetyltransferase -
  FOC71_RS03835 (FOC71_03835) - 728232..729335 (+) 1104 WP_003073846.1 LCP family protein -
  FOC71_RS03840 (FOC71_03840) - 729444..729719 (-) 276 Protein_726 hypothetical protein -
  FOC71_RS03845 (FOC71_03845) - 729729..730139 (-) 411 WP_003073842.1 HIT family protein -
  FOC71_RS03850 (FOC71_03850) pptA 730208..730939 (+) 732 WP_003073841.1 ABC transporter ATP-binding protein Regulator
  FOC71_RS03855 (FOC71_03855) - 730936..731982 (+) 1047 WP_003073839.1 ABC transporter permease -
  FOC71_RS03860 (FOC71_03860) ccrZ 732033..732830 (+) 798 WP_003073837.1 cell cycle regulator CcrZ -
  FOC71_RS03865 (FOC71_03865) trmB 732827..733462 (+) 636 WP_003073836.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FOC71_RS03870 (FOC71_03870) - 733863..734555 (+) 693 WP_003073834.1 VIT family protein -
  FOC71_RS03875 (FOC71_03875) rimP 734785..735255 (+) 471 WP_329518085.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27036.50 Da        Isoelectric Point: 4.5977

>NTDB_id=450003 FOC71_RS03850 WP_003073841.1 730208..730939(+) (pptA) [Streptococcus intermedius strain FDAARGOS_769]
MLEIKGLTGGYINIPVLKDISFTVENGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDNPMGYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVDQEVAFARVEQLLTKFRLKEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLKDEKTKGKSILMSTHVLDSAERMCDSFVILHKGEIRAKGNLSELQSEFSMPEASLNEIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=450003 FOC71_RS03850 WP_003073841.1 730208..730939(+) (pptA) [Streptococcus intermedius strain FDAARGOS_769]
ATGTTAGAAATAAAAGGGCTTACAGGCGGATATATAAATATCCCTGTTTTAAAAGATATCAGTTTCACGGTAGAAAATGG
TGAGCTGGTGGGCTTAATTGGTTTGAATGGTGCTGGAAAGTCTACAACAATCAATGAAATTATTGGACTTTTAACTCCTT
ATAAAGGGGAAATTTTAATTGACGGCGCTAAACTGCAAGATAATCCCATGGGTTATCGTAAGAAAATTGGATTTATTCCA
GAGACCCCTAGTTTATATGAGGAATTGACTTTAAGAGAGCACATTGAAACAGTTGCTATGGCTTATGATGTCGATCAAGA
GGTAGCTTTTGCGCGCGTGGAACAATTATTGACCAAGTTTCGCTTGAAAGAAAAATTGGATTGGTTCCCCGTTCACTTTT
CAAAGGGAATGAAGCAAAAAGTCATGATTATTTGCGCCTTTGTAGTTGATCCGAGTCTCTTTATCGTAGATGAGCCATTT
TTGGGACTCGATCCAGTAGCGATTGCTGATTTGATAGAGCTTTTGAAAGATGAAAAGACGAAAGGCAAGTCTATCCTGAT
GAGTACGCATGTGTTGGACTCAGCAGAAAGAATGTGTGATTCATTCGTGATTTTGCACAAGGGGGAAATCCGAGCGAAAG
GTAACTTATCAGAGTTGCAATCAGAATTTTCTATGCCAGAAGCTAGCCTGAATGAGATCTATCTGGCATTGACAGAAGAG
GCAAGTCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

71.13

98.354

0.7
  pptA Streptococcus salivarius strain HSISS4

70.711

98.354

0.695